RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 MAGIXQ9H6Y5 334 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 FBXO9Q9UK97 447 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-205ENST00000468338 ADAM18Q9Y3Q7 739 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 V9GYQ6 96 aa9.61□□□□□ -0.87
COL4A6-205ENST00000468338 SLC22A23A1A5C7 686 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 PRSS37A4D1T9 235 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 VSTM5A8MXK1 200 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 KRT36O76013 467 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SCG5P05408 212 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 HEXAP06865 529 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 NAT1P18440 290 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 FPR3P25089 353 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SDHAP31040 664 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 CDAP32320 146 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 GSSP48637 474 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 PPOXP50336 477 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 DSCR9P59020 149 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SNRPD2P62316 118 aaKnown RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SPIBQ01892 262 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SNTB2Q13425 540 aaKnown RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 MESTQ5EB52 335 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 C1orf94Q6P1W5 598 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 TMEM53Q6P2H8 277 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 CYP2R1Q6VVX0 501 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 DPY19L2P2Q6ZN68 376 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 Q6ZS46 218 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 DHFR2Q86XF0 187 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 ZDHHC21Q8IVQ6 265 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 CPEB3Q8NE35 698 aaKnown RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 POP5Q969H6 163 aaKnown RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 RSRC1Q96IZ7 334 aaKnown RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 REG4Q9BYZ8 158 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 C1orf198Q9H425 327 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 VSX1Q9NZR4 365 aaPredicted RBP9.6□□□□□ -0.87
COL4A6-205ENST00000468338 GRHPRQ9UBQ7 328 aa9.6□□□□□ -0.87
COL4A6-205ENST00000468338 SONP18583 2426 aaKnown RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 UNC119BA6NIH7 251 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ACOT8O14734 319 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ARPC3O15145 178 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SSX4O60224 188 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 GPRIN2O60269 458 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 LY6G6DO95868 133 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 PTHP01270 115 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 CST2P09228 141 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ZNF32P17041 273 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 PCSK6P29122 969 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 RRM2P31350 389 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 RPL4P36578 427 aaKnown RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 NUDT6P53370 316 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 KRTAP1-1Q07627 177 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ENDOGQ14249 297 aaKnown RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 RFX4Q33E94 735 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ZNF770Q6IQ21 691 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 KRT80Q6KB66 452 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 PGM2L1Q6PCE3 622 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SMARCD3Q6STE5 483 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 CLEC9AQ6UXN8 241 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 LRRC18Q8N456 261 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 PAQR4Q8N4S7 273 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SLC30A7Q8NEW0 376 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 OR4C15Q8NGM1 316 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 NSMAFQ92636 917 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 MRPL24Q96A35 216 aaKnown RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 ASB9Q96DX5 294 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SORCS2Q96PQ0 1159 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 WACQ9BTA9 647 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 TRIM15Q9C019 465 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 NDEL1Q9GZM8 345 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 KRCC1Q9NPI7 259 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SLC7A8Q9UHI5 535 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 AURKCQ9UQB9 309 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 CMAHPQ9Y471 501 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 SPEF1Q9Y4P9 236 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 LYVE1Q9Y5Y7 322 aa9.59□□□□□ -0.87
COL4A6-205ENST00000468338 NIPBLQ6KC79 2804 aaeCLIP9.58□□□□□ -0.88
COL4A6-205ENST00000468338 IGHV4-30-2A0A087WSY4 118 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 TEX13CA0A0J9YWL9 993 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 H7C1C5 153 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 IMPA2O14732 288 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 OR10H3O60404 316 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 CSF3P09919 207 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 CTLA4P16410 223 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 LAP3P28838 519 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 IFNGR2P38484 337 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 LCN6P62502 163 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 PSG4Q00888 419 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 TRAP1Q12931 704 aaKnown RBP9.58□□□□□ -0.88
COL4A6-205ENST00000468338 TSPAN31Q12999 210 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 CDK5R2Q13319 367 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 KRR1Q13601 381 aaKnown RBP9.58□□□□□ -0.88
COL4A6-205ENST00000468338 SGCAQ16586 387 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 PABPC1L2AQ5JQF8 200 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 SLC35F1Q5T1Q4 408 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 PGBD2Q6P3X8 592 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 PTCHD4Q6ZW05 846 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 ADCK1Q86TW2 530 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 SVOPLQ8N434 492 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 LINC00471Q8N535 108 aa9.58□□□□□ -0.88
COL4A6-205ENST00000468338 ZNF525Q8N782 197 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms