RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MTFP1Q9UDX5 166 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 ZNF223Q9UK11 482 aaPredicted RBP16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 SULT2B1O00204 365 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 BHLHE40O14503 412 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 OGG1O15527 345 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 APBB3O95704 486 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 SRMP19623 302 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 RAB5AP20339 215 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 EMDP50402 254 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 MGAT2Q10469 447 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 ZNF239Q16600 458 aaKnown RBP16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 PYY3Q5JQD4 70 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 UNQ6126/PRO20091Q6UXV3 157 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 METTL27Q8N6F8 245 aaPredicted RBP16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 OR5AP2Q8NGF4 316 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 BAHD1Q8TBE0 780 aaPredicted RBP16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 SMIM19Q96E16 107 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 CCDC3Q9BQI4 270 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 LAT2Q9GZY6 243 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 CBY1Q9Y3M2 126 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 TICRRQ7Z2Z1 1910 aa16.34■□□□□ 0.21
SNAPC3-205ENST00000467062 CALCBP10092 127 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 ST6GAL1P15907 406 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 ACTC1P68032 377 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 ACTA1P68133 377 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 FOXK2Q01167 660 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 ZNF85Q03923 595 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 SKP2Q13309 424 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 GXYLT1Q4G148 440 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 AKIRIN2Q53H80 203 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 TAF8Q7Z7C8 310 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 ARL14Q8N4G2 192 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 KISS1RQ969F8 398 aaPredicted RBP16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 S100PBPQ96BU1 408 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 OR14A2Q96R54 314 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 TNFRSF13CQ96RJ3 184 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 RPS10P5Q9NQ39 176 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 FAM96BQ9Y3D0 163 aa16.33■□□□□ 0.21
SNAPC3-205ENST00000467062 A0A1B0GTI1 187 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 LYPD3O95274 346 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CD74P04233 296 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 DBIP07108 87 aaKnown RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 NGFRP08138 427 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 OR4E1P0C645 316 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 AKAIN1P0CW23 69 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CAV2P51636 162 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 NUBP1P53384 320 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 POU4F2Q12837 409 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 AIMP2Q13155 320 aaKnown RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 FAM53BQ14153 422 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 ATXN7L3Q14CW9 347 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 NCMAPQ5T1S8 102 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 RFLNBQ8N5W9 214 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CDRT4Q8N9R6 151 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 SLC30A7Q8NEW0 376 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 OR52L1Q8NGH7 329 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 OR51S1Q8NGJ8 323 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 MIB2Q96AX9 1013 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 ANKRD9Q96BM1 317 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 ELF4Q99607 663 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 MESP1Q9BRJ9 268 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 C2orf88Q9BSF0 95 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CHST6Q9GZX3 395 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 FLRT3Q9NZU0 649 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 A0A0A6YYC8 382 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 RNASEK-C17orf49H0YIS7 233 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 I3L1I5 382 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 OR10H2O60403 315 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 PPP1R3DO95685 299 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 AGR2O95994 175 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 IGKV1D-16P01601 117 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 SBK2P0C263 348 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 GABRG2P18507 467 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 RBM34P42696 430 aaKnown RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 KCNAB1Q14722 419 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 LRRC37A5PQ49AS3 106 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 DEFB119Q8N690 84 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 ZNF433Q8N7K0 673 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 AVL9Q8NBF6 648 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 OR10R2Q8NGX6 335 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 MALSU1Q96EH3 234 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 PIK3IP1Q96FE7 263 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 CDCA3Q99618 268 aaPredicted RBP16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 POFUT1Q9H488 388 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 PCDHGA1Q9Y5H4 931 aa16.33■□□□□ 0.2
SNAPC3-205ENST00000467062 ALPK2Q86TB3 2170 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 FANCMQ8IYD8 2048 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 TCAPO15273 167 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 CTNSO60931 367 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 GLSO94925 669 aaPredicted RBP16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 MAGEB1P43366 347 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 PPM1FP49593 454 aaPredicted RBP16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 NAAAQ02083 359 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 CRMP1Q14194 572 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 CDK5R1Q15078 307 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 EIPR1Q53HC9 387 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 KRBOX4Q5JUW0 171 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 DRAM2Q6UX65 266 aa16.32■□□□□ 0.2
SNAPC3-205ENST00000467062 BAP18Q8IXM2 172 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms