RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 THAP10Q9P2Z0 257 aaPredicted RBP17.8■□□□□ 0.44
SDF4-205ENST00000465727 HEATR5AQ86XA9 2040 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 SPTBP11277 2137 aa17.8■□□□□ 0.44
SDF4-205ENST00000465727 LDLRAD4O15165 306 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 DUS4LO95620 317 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 S100A9P06702 114 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 ZNF28P17035 718 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 SLC17A1Q14916 467 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 GLYATL3Q5SZD4 288 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 AWAT2Q6E213 333 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 WBP2NLQ6ICG8 309 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 ASPHD2Q6ICH7 369 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 PRSS41Q7RTY9 318 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 PAQR4Q8N4S7 273 aaPredicted RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 C2CD4CQ8TF44 421 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 ZNF251Q9BRH9 671 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 PRMT8Q9NR22 394 aaPredicted RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 A0A1W2PPC1 479 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 H3BSH0 61 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 ACAA1P09110 424 aaPredicted RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 IGFBP3P17936 291 aaPredicted RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 CX3CR1P49238 355 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 RPS21P63220 83 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 SRSF3P84103 164 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 PEA15Q15121 130 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 TMEM184AQ6ZMB5 413 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 NUP54Q7Z3B4 507 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 TAF8Q7Z7C8 310 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 ZNF679Q8IYX0 411 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 MRPL43Q8N983 215 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 OR5T3Q8NGG3 340 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 RNF128Q8TEB7 428 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 SAT2Q96F10 170 aaPredicted RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 NRIP2Q9BQI9 281 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 ELOVL3Q9HB03 270 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 RCC2Q9P258 522 aaKnown RBP17.79■□□□□ 0.44
SDF4-205ENST00000465727 TBC1D29Q9UFV1 150 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 MPDZO75970 2070 aa17.79■□□□□ 0.44
SDF4-205ENST00000465727 H0YGG7 62 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 FOXS1O43638 330 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ADPRHP54922 357 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 RAB38P57729 211 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ARF3P61204 181 aaPredicted RBP17.78■□□□□ 0.44
SDF4-205ENST00000465727 ECH1Q13011 328 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 DGAT2L6Q6ZPD8 337 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 RNF44Q7L0R7 432 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ATG4DQ86TL0 474 aaPredicted RBP17.78■□□□□ 0.44
SDF4-205ENST00000465727 CACUL1Q86Y37 369 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 DCUN1D4Q92564 292 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 MOGAT1Q96PD6 335 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 TSPAN32Q96QS1 320 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 OR2M4Q96R27 311 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ACKR4Q9NPB9 350 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 LPAR3Q9UBY5 353 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 MRPS23Q9Y3D9 190 aaKnown RBP17.78■□□□□ 0.44
SDF4-205ENST00000465727 CSAG2Q9Y5P2 127 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 OTOL1A6NHN0 477 aaPredicted RBP17.78■□□□□ 0.44
SDF4-205ENST00000465727 DBX1A6NMT0 343 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ADH1BP00325 375 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 F13BP05160 661 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 FAM157CP0CG43 387 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 RAB6AP20340 208 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 SKP1P63208 163 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 CDNFQ49AH0 187 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 ASB5Q8WWX0 329 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 AQP3Q92482 292 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 WNT2BQ93097 391 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 LPAR4Q99677 370 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 APOOQ9BUR5 198 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 SLC17A9Q9BYT1 436 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 KCNG2Q9UJ96 466 aa17.78■□□□□ 0.44
SDF4-205ENST00000465727 STK17BO94768 372 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 FABP1P07148 127 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 C5AR1P21730 350 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 AVPR2P30518 371 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 IGFALSP35858 605 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 PTGFRP43088 359 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 SLC6A9P48067 706 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 TAS2R31P59538 309 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 RPL18Q07020 188 aaKnown RBP17.77■□□□□ 0.44
SDF4-205ENST00000465727 SMAD2Q15796 467 aaKnown RBP17.77■□□□□ 0.44
SDF4-205ENST00000465727 MEP1BQ16820 701 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 MISPQ8IVT2 679 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 C15orf54Q8N8G6 183 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 AMELYQ99218 206 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 TCEAL7Q9BRU2 100 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 CRB3Q9BUF7 120 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 NUDT9Q9BW91 350 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 EGLN1Q9GZT9 426 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 CYTL1Q9NRR1 136 aa17.77■□□□□ 0.44
SDF4-205ENST00000465727 EEF1E1-BLOC1S5C9J1V9 151 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 H7C1C5 153 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 SGCEO43556 437 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
SDF4-205ENST00000465727 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 TBPP20226 339 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 RPS27P42677 84 aaKnown RBP17.76■□□□□ 0.43
SDF4-205ENST00000465727 CAV2P51636 162 aa17.76■□□□□ 0.43
SDF4-205ENST00000465727 LCN6P62502 163 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms