RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 KCNN2Q9H2S1 579 aa7.72□□□□□ -1.17
APP-213ENST00000464867 RANBP3Q9H6Z4 567 aaPredicted RBP7.72□□□□□ -1.17
APP-213ENST00000464867 RAB18Q9NP72 206 aa7.72□□□□□ -1.17
APP-213ENST00000464867 MAN2C1Q9NTJ4 1040 aa7.72□□□□□ -1.17
APP-213ENST00000464867 ZNRD1Q9P1U0 126 aa7.72□□□□□ -1.17
APP-213ENST00000464867 CCL27Q9Y4X3 112 aa7.72□□□□□ -1.17
APP-213ENST00000464867 CLIC3O95833 236 aa7.71□□□□□ -1.18
APP-213ENST00000464867 DBIP07108 87 aaKnown RBP7.71□□□□□ -1.18
APP-213ENST00000464867 MMP9P14780 707 aa7.71□□□□□ -1.18
APP-213ENST00000464867 PTMSP20962 102 aa7.71□□□□□ -1.18
APP-213ENST00000464867 SLC6A2P23975 617 aa7.71□□□□□ -1.18
APP-213ENST00000464867 STOMP27105 288 aa7.71□□□□□ -1.18
APP-213ENST00000464867 ARRB2P32121 409 aa7.71□□□□□ -1.18
APP-213ENST00000464867 PHBP35232 272 aa7.71□□□□□ -1.18
APP-213ENST00000464867 SERPINB9P50453 376 aa7.71□□□□□ -1.18
APP-213ENST00000464867 ARHGDIAP52565 204 aa7.71□□□□□ -1.18
APP-213ENST00000464867 NAA20P61599 178 aa7.71□□□□□ -1.18
APP-213ENST00000464867 PPP1CBP62140 327 aa7.71□□□□□ -1.18
APP-213ENST00000464867 HBA1P69905 142 aa7.71□□□□□ -1.18
APP-213ENST00000464867 COX10Q12887 443 aa7.71□□□□□ -1.18
APP-213ENST00000464867 ZNF404Q494X3 552 aa7.71□□□□□ -1.18
APP-213ENST00000464867 GALNTL6Q49A17 601 aa7.71□□□□□ -1.18
APP-213ENST00000464867 CFAP157Q5JU67 520 aa7.71□□□□□ -1.18
APP-213ENST00000464867 MRPL2Q5T653 305 aaKnown RBP7.71□□□□□ -1.18
APP-213ENST00000464867 TNFAIP8L2Q6P589 184 aaPredicted RBP7.71□□□□□ -1.18
APP-213ENST00000464867 C5orf46Q6UWT4 87 aa7.71□□□□□ -1.18
APP-213ENST00000464867 DCDC5Q6ZRR9 648 aa7.71□□□□□ -1.18
APP-213ENST00000464867 CALHM3Q86XJ0 350 aa7.71□□□□□ -1.18
APP-213ENST00000464867 ZNF101Q8IZC7 436 aa7.71□□□□□ -1.18
APP-213ENST00000464867 C1orf87Q8N0U7 546 aa7.71□□□□□ -1.18
APP-213ENST00000464867 MIPOL1Q8TD10 442 aa7.71□□□□□ -1.18
APP-213ENST00000464867 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
APP-213ENST00000464867 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.18
APP-213ENST00000464867 FAM234AQ9H0X4 552 aa7.71□□□□□ -1.18
APP-213ENST00000464867 GSTO2Q9H4Y5 243 aa7.71□□□□□ -1.18
APP-213ENST00000464867 MTHFD2LQ9H903 347 aaPredicted RBP7.71□□□□□ -1.18
APP-213ENST00000464867 TMEM38BQ9NVV0 291 aa7.71□□□□□ -1.18
APP-213ENST00000464867 SNX12Q9UMY4 172 aa7.71□□□□□ -1.18
APP-213ENST00000464867 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.18
APP-213ENST00000464867 CSMD3Q7Z407 3707 aa7.71□□□□□ -1.18
APP-213ENST00000464867 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
APP-213ENST00000464867 C5orf49A4QMS7 147 aa7.7□□□□□ -1.18
APP-213ENST00000464867 C22orf46C9J442 243 aa7.7□□□□□ -1.18
APP-213ENST00000464867 FBP2O00757 339 aa7.7□□□□□ -1.18
APP-213ENST00000464867 NPHS1O60500 1241 aa7.7□□□□□ -1.18
APP-213ENST00000464867 LYPLA1O75608 230 aaPredicted RBP7.7□□□□□ -1.18
APP-213ENST00000464867 CHEK2O96017 543 aa7.7□□□□□ -1.18
APP-213ENST00000464867 GKN3PP0CG01 181 aa7.7□□□□□ -1.18
APP-213ENST00000464867 IRF2P14316 349 aa7.7□□□□□ -1.18
APP-213ENST00000464867 GRPRP30550 384 aa7.7□□□□□ -1.18
APP-213ENST00000464867 GDI2P50395 445 aaKnown RBP7.7□□□□□ -1.18
APP-213ENST00000464867 CAV1Q03135 178 aa7.7□□□□□ -1.18
APP-213ENST00000464867 RUNDC3AQ59EK9 446 aa7.7□□□□□ -1.18
APP-213ENST00000464867 FAM69AQ5T7M9 428 aa7.7□□□□□ -1.18
APP-213ENST00000464867 ARL9Q6T311 187 aa7.7□□□□□ -1.18
APP-213ENST00000464867 UNQ9370/PRO34162Q6UXP9 181 aa7.7□□□□□ -1.18
APP-213ENST00000464867 PEX5LQ8IYB4 626 aa7.7□□□□□ -1.18
APP-213ENST00000464867 CLEC4FQ8N1N0 589 aa7.7□□□□□ -1.18
APP-213ENST00000464867 SCAIQ8N9R8 606 aa7.7□□□□□ -1.18
APP-213ENST00000464867 OR4K5Q8NGD3 323 aa7.7□□□□□ -1.18
APP-213ENST00000464867 PPP1R35Q8TAP8 253 aa7.7□□□□□ -1.18
APP-213ENST00000464867 SLC38A4Q969I6 547 aa7.7□□□□□ -1.18
APP-213ENST00000464867 COQ8BQ96D53 544 aa7.7□□□□□ -1.18
APP-213ENST00000464867 TXNDC15Q96J42 360 aa7.7□□□□□ -1.18
APP-213ENST00000464867 OR2V2Q96R30 315 aa7.7□□□□□ -1.18
APP-213ENST00000464867 DUSP26Q9BV47 211 aa7.7□□□□□ -1.18
APP-213ENST00000464867 PTDSS2Q9BVG9 487 aa7.7□□□□□ -1.18
APP-213ENST00000464867 KRTAP4-2Q9BYR5 136 aa7.7□□□□□ -1.18
APP-213ENST00000464867 NPFFR1Q9GZQ6 430 aa7.7□□□□□ -1.18
APP-213ENST00000464867 ELOVL3Q9HB03 270 aa7.7□□□□□ -1.18
APP-213ENST00000464867 ERVK-18Q9QC07 812 aa7.7□□□□□ -1.18
APP-213ENST00000464867 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
APP-213ENST00000464867 A0A1B0GVI7 797 aa7.69□□□□□ -1.18
APP-213ENST00000464867 FZD7O75084 574 aa7.69□□□□□ -1.18
APP-213ENST00000464867 FSTL3O95633 263 aa7.69□□□□□ -1.18
APP-213ENST00000464867 CYB5R3P00387 301 aaPredicted RBP7.69□□□□□ -1.18
APP-213ENST00000464867 HLA-DOBP13765 273 aa7.69□□□□□ -1.18
APP-213ENST00000464867 TCP1P17987 556 aaKnown RBP7.69□□□□□ -1.18
APP-213ENST00000464867 GSTM3P21266 225 aa7.69□□□□□ -1.18
APP-213ENST00000464867 CBLP22681 906 aa7.69□□□□□ -1.18
APP-213ENST00000464867 PLTPP55058 493 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ARF6P62330 175 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ZCCHC23Q6ZST2 131 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ATG16L2Q8NAA4 619 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ADPRHL1Q8NDY3 354 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ERP44Q9BS26 406 aa7.69□□□□□ -1.18
APP-213ENST00000464867 DCTN5Q9BTE1 182 aa7.69□□□□□ -1.18
APP-213ENST00000464867 SPATA9Q9BWV2 254 aa7.69□□□□□ -1.18
APP-213ENST00000464867 SIRPDQ9H106 197 aa7.69□□□□□ -1.18
APP-213ENST00000464867 ARMC7Q9H6L4 198 aa7.69□□□□□ -1.18
APP-213ENST00000464867 CACYBPQ9HB71 228 aaKnown RBP7.69□□□□□ -1.18
APP-213ENST00000464867 CCNB1IP1Q9NPC3 277 aa7.69□□□□□ -1.18
APP-213ENST00000464867 RLIMQ9NVW2 624 aa7.69□□□□□ -1.18
APP-213ENST00000464867 GFOD1Q9NXC2 390 aa7.69□□□□□ -1.18
APP-213ENST00000464867 GLTPQ9NZD2 209 aa7.69□□□□□ -1.18
APP-213ENST00000464867 TMEM216Q9P0N5 145 aa7.69□□□□□ -1.18
APP-213ENST00000464867 MAB21L2Q9Y586 359 aa7.69□□□□□ -1.18
APP-213ENST00000464867 A0A087WUJ7 227 aa7.68□□□□□ -1.18
APP-213ENST00000464867 EXOC1LA0A1B0GW35 172 aa7.68□□□□□ -1.18
APP-213ENST00000464867 A0A1W2PRX2 142 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms