RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 PSG4Q00888 419 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 FMODQ06828 376 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 CDK5R2Q13319 367 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 ZMYND11Q15326 602 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 TAF11Q15544 211 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 SGCAQ16586 387 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 DUSP7Q16829 419 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 AGKQ53H12 422 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 DLEU7Q6UYE1 221 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 C17orf107Q6ZR85 190 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 LRRC28Q86X40 367 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-220ENST00000464800 ALDH16A1Q8IZ83 802 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 ZNF283Q8N7M2 679 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 C11orf65Q8NCR3 313 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 GPR32P1Q8NGA4 272 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 WFDC12Q8WWY7 111 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 NSMAFQ92636 917 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 OR2H1Q9GZK4 316 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 ELOVL3Q9HB03 270 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 INIPQ9NRY2 104 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 IL20RAQ9UHF4 553 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 LRCH1Q9Y2L9 728 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 NOTCH1P46531 2555 aa12.29□□□□□ -0.44
MCF2L-220ENST00000464800 A0A1B0GUS0 222 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 NGFP01138 241 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 PPIAL4GP0DN37 164 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 CD247P20963 164 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 GSTM3P21266 225 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 PAX8Q06710 450 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 CD47Q08722 323 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 CYP51A1Q16850 503 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 RUNDC3AQ59EK9 446 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 C16orf87Q6PH81 154 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 BTNL3Q6UXE8 466 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 TSPYL5Q86VY4 417 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 PTOV1Q86YD1 416 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 RBM45Q8IUH3 476 aaKnown RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 MUC20Q8N307 709 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 OR2Z1Q8NG97 314 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 OR4D11Q8NGI4 311 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 SAMD8Q96LT4 415 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 CPPED1Q9BRF8 314 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 WNT5BQ9H1J7 359 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 NANOGQ9H9S0 305 aa12.28□□□□□ -0.44
MCF2L-220ENST00000464800 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-220ENST00000464800 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 M0QX08 132 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 PLATP00750 562 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 CD80P33681 288 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 AQP2P41181 271 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 PCBD1P61457 104 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 PSG7Q13046 419 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 FAM27BQ5VT28 67 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 ARL9Q6T311 187 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 LRRN1Q6UXK5 716 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 JAZF1Q86VZ6 243 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 NPEPL1Q8NDH3 523 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 OR4F5Q8NH21 305 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 LRRC8CQ8TDW0 803 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
MCF2L-220ENST00000464800 UPRTQ96BW1 309 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
MCF2L-220ENST00000464800 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 SIGLEC11Q96RL6 698 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 SSBP3Q9BWW4 388 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-220ENST00000464800 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 PPP1R3CQ9UQK1 317 aa12.27□□□□□ -0.45
MCF2L-220ENST00000464800 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-220ENST00000464800 IGKV1D-43A0A0B4J1Z2 117 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 MDFIC2A0A1B0GVS7 189 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 CEACAM18A8MTB9 384 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 ERLIN1O75477 346 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 OR7A10O76100 309 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 ABHD16AO95870 558 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 MT-ND1P03886 318 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 CST2P09228 141 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 FUT1P19526 365 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 LAP3P28838 519 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 SRSF4Q08170 494 aaKnown RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 BEND6Q5SZJ8 279 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 ZNF362Q5T0B9 420 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 BRICD5Q6PL45 260 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 PFN4Q8NHR9 129 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 ITLN1Q8WWA0 313 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 THOC1Q96FV9 657 aaKnown RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 CCT8L2Q96SF2 557 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 PRSS27Q9BQR3 290 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 MMP27Q9H306 513 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 BEX1Q9HBH7 125 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 MAN2C1Q9NTJ4 1040 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 PDP1Q9P0J1 537 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-220ENST00000464800 IL19Q9UHD0 177 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 TIMM10BQ9Y5J6 103 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 DOCK11Q5JSL3 2073 aa12.26□□□□□ -0.45
MCF2L-220ENST00000464800 IGHV2-70DA0A0C4DH43 119 aa12.25□□□□□ -0.45
MCF2L-220ENST00000464800 NPIPB13A6NJU9 1138 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms