RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 B4DSR2 109 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 WNT9BO14905 357 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 PPIHO43447 177 aaKnown RBP16.16■□□□□ 0.18
VARS-220ENST00000461874 AHCYL1O43865 530 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 SCG5P05408 212 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 RHCEP18577 417 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 GLO1Q04760 184 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 ZNF718Q3SXZ3 478 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 SPATA46Q5T0L3 261 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 ZNF774Q6NX45 483 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 FAM122BQ7Z309 247 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 SYT9Q86SS6 491 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 C1orf174Q8IYL3 243 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 GTF3AQ92664 365 aaKnown RBP16.16■□□□□ 0.18
VARS-220ENST00000461874 FAM46AQ96IP4 442 aaKnown RBP16.16■□□□□ 0.18
VARS-220ENST00000461874 NDEL1Q9GZM8 345 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 ADA2Q9NZK5 511 aa16.16■□□□□ 0.18
VARS-220ENST00000461874 TMEFF2Q9UIK5 374 aaPredicted RBP16.16■□□□□ 0.18
VARS-220ENST00000461874 PRSS37A4D1T9 235 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 C12orf71A8MTZ7 269 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 XKRYO14609 159 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 SNX3O60493 162 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 ICMTO60725 284 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 CDC14BO60729 498 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 MT-ND5P03915 603 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 GCH1P30793 250 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 MPV17P39210 176 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 CRYBB2P43320 205 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 OMPP47874 163 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 LIMS1P48059 325 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 DVL1P1P54792 670 aaPredicted RBP16.15■□□□□ 0.18
VARS-220ENST00000461874 MESTQ5EB52 335 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 MBNL2Q5VZF2 373 aaKnown RBP16.15■□□□□ 0.18
VARS-220ENST00000461874 FAM86B1Q8N7N1 296 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 ABHD4Q8TB40 342 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 SLC25A40Q8TBP6 338 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 KLF14Q8TD94 323 aaPredicted RBP16.15■□□□□ 0.18
VARS-220ENST00000461874 WACQ9BTA9 647 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 OR2J1Q9GZK6 312 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 NARFLQ9H6Q4 476 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 SAMD4AQ9UPU9 718 aaKnown RBP16.15■□□□□ 0.18
VARS-220ENST00000461874 SIGLEC7Q9Y286 467 aa16.15■□□□□ 0.18
VARS-220ENST00000461874 GMNNO75496 209 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 NDUFB2O95178 105 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 NGFP01138 241 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 TFP02787 698 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 MMP15P51511 669 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 PPP1CBP62140 327 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 TMEM255AQ5JRV8 349 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 FGD3Q5JSP0 725 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 RFPL4BQ6ZWI9 263 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 RNF148Q8N7C7 305 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 IPCEF1Q8WWN9 437 aaPredicted RBP16.14■□□□□ 0.17
VARS-220ENST00000461874 DHRS1Q96LJ7 313 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 ZNF570Q96NI8 536 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 GPX7Q96SL4 187 aaPredicted RBP16.14■□□□□ 0.17
VARS-220ENST00000461874 NSRP1Q9H0G5 558 aaKnown RBP16.14■□□□□ 0.17
VARS-220ENST00000461874 GORASP2Q9H8Y8 452 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 EMC7Q9NPA0 242 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 NRIP3Q9NQ35 241 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 DECR2Q9NUI1 292 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 TREM2Q9NZC2 230 aa16.14■□□□□ 0.17
VARS-220ENST00000461874 IGHV1-69-2A0A0G2JMI3 117 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 TEX13CA0A0J9YWL9 993 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 TRBV4-1A0A0J9YWV2 114 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 FAM157AC9JC47 383 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 H3BSA7 217 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 DIRAS1O95057 198 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 CTLA4P16410 223 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 ZNF81P51508 661 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 LMO4P61968 165 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 TEKQ02763 1124 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 KRR1Q13601 381 aaKnown RBP16.13■□□□□ 0.17
VARS-220ENST00000461874 SEC23BQ15437 767 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 TSTQ16762 297 aaKnown RBP16.13■□□□□ 0.17
VARS-220ENST00000461874 GPR139Q6DWJ6 353 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 THSD4Q6ZMP0 1018 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 CPLX4Q7Z7G2 160 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 RASD2Q96D21 266 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 RSRC1Q96IZ7 334 aaKnown RBP16.13■□□□□ 0.17
VARS-220ENST00000461874 C4orf45Q96LM5 186 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 FUZQ9BT04 418 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 ELOVL3Q9HB03 270 aa16.13■□□□□ 0.17
VARS-220ENST00000461874 NDRG4Q9ULP0 352 aaKnown RBP16.13■□□□□ 0.17
VARS-220ENST00000461874 TPD52L2O43399 206 aaKnown RBP16.12■□□□□ 0.17
VARS-220ENST00000461874 IGHV1-46P01743 117 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 GAAP10253 952 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 COX5BP10606 129 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 PCMT1P22061 227 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 SDHAP31040 664 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 ARHGDIAP52565 204 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 SCRN3Q0VDG4 424 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 KRTAP24-1Q3LI83 254 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 FAM209AQ5JX71 171 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 USP51Q70EK9 711 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 GLCCI1Q86VQ1 547 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 OR52J3Q8NH60 311 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 SAP30LQ9HAJ7 183 aa16.12■□□□□ 0.17
VARS-220ENST00000461874 KRCC1Q9NPI7 259 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms