RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 IGFL2Q6UWQ7 119 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ABHD13Q7L211 337 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 EIF3MQ7L2H7 374 aaKnown RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 OAFQ86UD1 273 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 COMTD1Q86VU5 262 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ERO1BQ86YB8 467 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 MMAAQ8IVH4 418 aaKnown RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 KRT222Q8N1A0 295 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ANKRD7Q92527 254 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 IL22RA2Q969J5 263 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 FAM3DQ96BQ1 224 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF799Q96GE5 643 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 SERPINB12Q96P63 405 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 BPIFA3Q9BQP9 254 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 C11orf70Q9BRQ4 267 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 LLPHQ9BRT6 129 aaKnown RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 MTG1Q9BT17 334 aaPredicted RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 EXO5Q9H790 373 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 GEMIN7Q9H840 131 aaKnown RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 IL20Q9NYY1 176 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 MRPS18BQ9Y676 258 aaKnown RBP3.6□□□□□ -1.83
CCDC50-203ENST00000460064 GAKO14976 1311 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 MYO3BQ8WXR4 1341 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 PLEKHG2Q9H7P9 1386 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 WDR62O43379 1518 aa3.6□□□□□ -1.83
CCDC50-203ENST00000460064 PLAC8L1A1L4L8 177 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 HSBP1L1C9JCN9 74 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 TMX2-CTNND1H3BSU7 103 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 WRBO00258 174 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 RRP8O43159 456 aaKnown RBP3.59□□□□□ -1.83
CCDC50-203ENST00000460064 DNAJB6O75190 326 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 SMC2O95347 1197 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 IVLP07476 585 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 RALBP11234 206 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 AQP2P41181 271 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 TCP10Q12799 353 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 SELENBP1Q13228 472 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 PON3Q15166 354 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 TMEM255AQ5JRV8 349 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 ANKRD22Q5VYY1 191 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 ZNF493Q6ZR52 646 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 NKAIN4Q8IVV8 208 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 CMTM1Q8IZ96 169 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 PRELID2Q8N945 189 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 CD300LFQ8TDQ1 290 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 TSEN15Q8WW01 171 aaKnown RBP3.59□□□□□ -1.83
CCDC50-203ENST00000460064 LRRC45Q96CN5 670 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 OR5B12Q96R08 314 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 TAAR1Q96RJ0 339 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 IFI27L2Q9H2X8 130 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 GPATCH2LQ9NWQ4 482 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 HRASLS2Q9NWW9 162 aa3.59□□□□□ -1.83
CCDC50-203ENST00000460064 ZNFX1Q9P2E3 1918 aaKnown RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 A0A1B0GTQ1 180 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF879B4DU55 563 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 C11orf94C9JXX5 98 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 NDUFAB1O14561 156 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 CD5LO43866 347 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 DPM1O60762 260 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 OR2F2O95006 317 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 CSTAP01040 98 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 PLEKP08567 350 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 GNAO1P09471 354 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 NUP62P37198 522 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 MAGEA1P43355 309 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 UQCRFS1P47985 274 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 SLC7A9P82251 487 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 SLC25A11Q02978 314 aaKnown RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 IL18Q14116 193 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 KCTD19Q17RG1 926 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 MTERF4Q7Z6M4 381 aaKnown RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 IQCKQ8N0W5 287 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 TCAIMQ8N3R3 496 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 UQCC2Q9BRT2 126 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF629Q9UEG4 869 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 LGALS13Q9UHV8 139 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 CD84Q9UIB8 345 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF223Q9UK11 482 aaPredicted RBP3.58□□□□□ -1.84
CCDC50-203ENST00000460064 WSB1Q9Y6I7 421 aa3.58□□□□□ -1.84
CCDC50-203ENST00000460064 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 K7ERQ8 282 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 YKT6O15498 198 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 HUS1O60921 280 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 NIPSNAP2O75323 286 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 SRP72O76094 671 aaKnown RBP3.57□□□□□ -1.84
CCDC50-203ENST00000460064 RAB3DO95716 219 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 FABP3P05413 133 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 ACSM4P0C7M7 580 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 U2AF2P26368 475 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCDC50-203ENST00000460064 HAAOP46952 286 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 ZNF136P52737 540 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 MAP3K7CLP57077 242 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 PAX5Q02548 391 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 DNAJC3Q13217 504 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 COTL1Q14019 142 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 GGTLC2Q14390 218 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
CCDC50-203ENST00000460064 LYPD2Q6UXB3 125 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms