RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MAGOHP61326 146 aaKnown RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 PPP1CBP62140 327 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 TNFAIP6P98066 277 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 RPL18Q07020 188 aaKnown RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 CD47Q08722 323 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 BAMBIQ13145 260 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 SGCAQ16586 387 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 RUNDC3AQ59EK9 446 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 MTX3Q5HYI7 312 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 PAGE3Q5JUK9 113 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 THEM4Q5T1C6 240 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 FAM27BQ5VT28 67 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 DHDDSQ86SQ9 333 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 MUC20Q8N307 709 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 C10orf111Q8N326 155 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 LRRC17Q8N6Y2 441 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 SIGLECL1Q8N7X8 197 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 ABHD4Q8TB40 342 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 SLC25A40Q8TBP6 338 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 LRRC8CQ8TDW0 803 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 TSPEARQ8WU66 669 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 IPCEF1Q8WWN9 437 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 LIPHQ8WWY8 451 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 DVL3Q92997 716 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 SGTBQ96EQ0 304 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 MAGEB18Q96M61 343 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 RBP7Q96R05 134 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 ALG12Q9BV10 488 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 SLITRK2Q9H156 845 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 IKZF5Q9H5V7 419 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 NANOGQ9H9S0 305 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 MAN2C1Q9NTJ4 1040 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 OR5V1Q9UGF6 321 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 IL20RAQ9UHF4 553 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 BAG5Q9UL15 447 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 NDRG4Q9ULP0 352 aaKnown RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 NDUFAF1Q9Y375 327 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 PPIAL4AQ9Y536 164 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 TIMM10BQ9Y5J6 103 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 CACNG2Q9Y698 323 aa6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 V9GYY5 206 aaPredicted RBP6.79□□□□□ -1.32
NIF3L1-209ENST00000454952 A0A1B0GUS0 222 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 DNAJC9-AS1A6NH13 148 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 A6NIZ1 184 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ZSCAN5BA6NJL1 495 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 C12orf71A8MTZ7 269 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 A8MXK9 166 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 OR5F1O95221 314 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 LYPD3O95274 346 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 IGHV2-70P01814 119 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 OPN1SWP03999 348 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 F13BP05160 661 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 RNASE1P07998 156 aaKnown RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 CST2P09228 141 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 SBK2P0C263 348 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 PPIAL4GP0DN37 164 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF12P17014 697 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 WNT5AP41221 380 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 TAS2R41P59536 307 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 RAP1BP61224 184 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 BTG1P62324 171 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 RAP1AP62834 184 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF154Q13106 437 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ESCO2Q56NI9 601 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 SPATA46Q5T0L3 261 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ARMC4Q5T2S8 1044 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 BTNL3Q6UXE8 466 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 DLEU7Q6UYE1 221 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 SYT9Q86SS6 491 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 PTOV1Q86YD1 416 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF101Q8IZC7 436 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 DPP10Q8N608 796 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 ZNF283Q8N7M2 679 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 DEFB108BQ8NET1 73 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 GPR32P1Q8NGA4 272 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 VANGL1Q8TAA9 524 aaPredicted RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 STON2Q8WXE9 905 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 C22orf15Q8WYQ4 148 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 GTF3AQ92664 365 aaKnown RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 LRRC58Q96CX6 371 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 THOC1Q96FV9 657 aaKnown RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 C4orf45Q96LM5 186 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 SAMD8Q96LT4 415 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 CGREF1Q99674 301 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 SH3GL1Q99961 368 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 WFDC6Q9BQY6 131 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 OR2H1Q9GZK4 316 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 OR2J1Q9GZK6 312 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 NDEL1Q9GZM8 345 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 MS4A7Q9GZW8 240 aaPredicted RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 TXNIPQ9H3M7 391 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 TMEM106BQ9NUM4 274 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 MRGBPQ9NV56 204 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 LRCH1Q9Y2L9 728 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 MED31Q9Y3C7 131 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 UGT2A1Q9Y4X1 527 aa6.78□□□□□ -1.32
NIF3L1-209ENST00000454952 LOC100509620A0A075B734 347 aa6.77□□□□□ -1.33
NIF3L1-209ENST00000454952 KCNAB3O43448 404 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms