RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 CXCR4P61073 352 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TUBA1BP68363 451 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TUBA4AP68366 448 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 CDK5R2Q13319 367 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TOP3AQ13472 1001 aaPredicted RBP15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 SLC25A30Q5SVS4 291 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 DNM1P46Q6ZS02 220 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 TUBA1AQ71U36 451 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 FAM122BQ7Z309 247 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 IGFN1Q86VF2 1251 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 UEVLDQ8IX04 471 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 ZNF786Q8N393 782 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 CNIH3Q8TBE1 160 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 APH1BQ8WW43 257 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 FBXO17Q96EF6 278 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 YTHDF1Q9BYJ9 559 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 MOV10Q9HCE1 1003 aaKnown RBP15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 B3GAT1Q9P2W7 334 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 KLHL21Q9UJP4 597 aa15.66■□□□□ 0.1
SQSTM1-204ENST00000453046 ARPC4-TTLL3A0A0A6YYG9 625 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 H7C417 338 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 M0R3G1 203 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 RNF13O43567 381 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 WBP4O75554 376 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 ZNF432O94892 652 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 CCDC159P0C7I6 412 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 HOXB1P14653 301 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 SDHAP31040 664 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 DSCR9P59020 149 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 ARF1P84077 181 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 EFNB1P98172 346 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 KCTD21Q4G0X4 260 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 RBM48Q5RL73 367 aaKnown RBP15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 C6orf141Q5SZD1 244 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 MEDAGQ5VYS4 303 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 FAM205BPQ63HN1 556 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 TCEANCQ8N8B7 351 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 Q96MT0 163 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 ERMAPQ96PL5 475 aaPredicted RBP15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 ZNF696Q9H7X3 374 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 MYRFQ9Y2G1 1151 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 ADAM18Q9Y3Q7 739 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 IER3IP1Q9Y5U9 82 aa15.65■□□□□ 0.1
SQSTM1-204ENST00000453046 IGHV4-30-2A0A087WSY4 118 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 LOC102725191A0A1B0GVB3 256 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 C11orf98E9PRG8 122 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 RPL36A-HNRNPH2H7BZ11 118 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 F13BP05160 661 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 AHCYP23526 432 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CAPZA2P47755 286 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 DAP3P51398 398 aaKnown RBP15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 ERVK-25P63136 954 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CSNK2BP67870 215 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 KRTAP1-1Q07627 177 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 OCLNQ16625 522 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CEACAM16Q2WEN9 425 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CARD17Q5XLA6 110 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 PXKQ7Z7A4 578 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 ADCK1Q86TW2 530 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 UBE2FQ969M7 185 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 OR2M2Q96R28 347 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 SNX18Q96RF0 628 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 IL4I1Q96RQ9 567 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 TXNIPQ9H3M7 391 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CRLF2Q9HC73 371 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 GPR35Q9HC97 309 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 CLN6Q9NWW5 311 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 NOX1Q9Y5S8 564 aa15.64■□□□□ 0.09
SQSTM1-204ENST00000453046 TEX13CA0A0J9YWL9 993 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 A0A1W2PRG6 482 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 MS4A18H0YCH9 400 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC1A7O00341 560 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 TRAF3IP2O43734 574 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 TLX2O43763 284 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 PAICSP22234 425 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 GABARAPL2P60520 117 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 POU3F1Q03052 451 aaPredicted RBP15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 KRR1Q13601 381 aaKnown RBP15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 MS4A18Q3C1V0 323 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 LAIR2Q6ISS4 152 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 VHLLQ6RSH7 139 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 HDDC2Q7Z4H3 204 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 GID4Q8IVV7 300 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF525Q8N782 197 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 FAM168AQ92567 244 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 LRR1Q96L50 414 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 TSPAN32Q96QS1 320 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 EMC6Q9BV81 110 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 NELFAQ9H3P2 528 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 YAE1D1Q9NRH1 226 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 GRHPRQ9UBQ7 328 aa15.63■□□□□ 0.09
SQSTM1-204ENST00000453046 MAGEA13PA6NCF6 341 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 SNTNA6NMZ2 147 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF726A6NNF4 738 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 PRODHO43272 600 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CD5LO43866 347 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 SERPINI2O75830 405 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 LYNP07948 512 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CECR9P0C854 216 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 HLA-DOBP13765 273 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms