RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 COL8A2P25067 703 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 GCH1P30793 250 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SDHAP31040 664 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 MPV17P39210 176 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 WNT5AP41221 380 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 RAD52P43351 418 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 OMPP47874 163 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 HTR5AP47898 357 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 LIMS1P48059 325 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 GZMKP49863 264 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 FXYD6P3P58550 94 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SELENOVP59797 346 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 DGCR6Q14129 220 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ENDOGQ14249 297 aaKnown RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 TSTQ16762 297 aaKnown RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 ANKDD1AQ495B1 522 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 NRN1LQ496H8 165 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 FAM166AQ6J272 317 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 C1orf94Q6P1W5 598 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 TMEM154Q6P9G4 183 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 PTCHD4Q6ZW05 846 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 FAM122BQ7Z309 247 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 PIGWQ7Z7B1 504 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ZDHHC21Q8IVQ6 265 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ZNF786Q8N393 782 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SLC25A40Q8TBP6 338 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 FNDC8Q8TC99 324 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 C11orf40Q8WZ69 217 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 YIPF5Q969M3 257 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 MSI2Q96DH6 328 aaKnown RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 POM121L2Q96KW2 1035 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 GPA33Q99795 319 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 BEX2Q9BXY8 128 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 BCL2L14Q9BZR8 327 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 OR2H1Q9GZK4 316 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 OR2J1Q9GZK6 312 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SHARPINQ9H0F6 387 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 SYT4Q9H2B2 425 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 MS4A5Q9H3V2 200 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 FN3KQ9H479 309 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 GORASP2Q9H8Y8 452 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 POLE4Q9NR33 117 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 ZNF275Q9NSD4 429 aaPredicted RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 EIF3KQ9UBQ5 218 aaKnown RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 SIGLEC7Q9Y286 467 aa8.29□□□□□ -1.08
USP54-207ENST00000451492 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
USP54-207ENST00000451492 SONP18583 2426 aaKnown RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 PRSS37A4D1T9 235 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 C17orf100A8MU93 164 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 PPIHO43447 177 aaKnown RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 SPRY3O43610 288 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 LMX1BO60663 402 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 ABHD16AO95870 558 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 GPR6P46095 362 aaPredicted RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 EVX1P49640 407 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 RPS6KA3P51812 740 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 CHN2P52757 468 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 PCBD1P61457 104 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 PPP1R8Q12972 351 aaKnown RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 HNRNPA0Q13151 305 aaKnown RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 MEP1BQ16820 701 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 TMEM255AQ5JRV8 349 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 AVPI1Q5T686 147 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 FAM27BQ5VT28 67 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 LEG1Q6P5S2 330 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 SMARCD3Q6STE5 483 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 JAZF1Q86VZ6 243 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 HIPK1Q86Z02 1210 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 ALDH16A1Q8IZ83 802 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 FITM2Q8N6M3 262 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 ZNF540Q8NDQ6 660 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 TSSK2Q96PF2 358 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 ERMAPQ96PL5 475 aaPredicted RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 CCT8L2Q96SF2 557 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 IFT27Q9BW83 186 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 OR52D1Q9H346 318 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 POFUT1Q9H488 388 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 LPAR2Q9HBW0 351 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 HINT3Q9NQE9 182 aaKnown RBP8.28□□□□□ -1.08
USP54-207ENST00000451492 NDE1Q9NXR1 346 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 CD300AQ9UGN4 299 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 TMCC3Q9ULS5 477 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
USP54-207ENST00000451492 FBN1P35555 2871 aaKnown RBP8.27□□□□□ -1.09
USP54-207ENST00000451492 IGLV3-9A0A075B6K5 115 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 C12orf71A8MTZ7 269 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 B2RBV5 119 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 WNT9BO14905 357 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 SGCEO43556 437 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 LILRA1O75019 489 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 NGFP01138 241 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 ZNF250P15622 560 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 GIFP27352 417 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 RBMXP38159 391 aaKnown RBP8.27□□□□□ -1.09
USP54-207ENST00000451492 CDKN2AP42771 156 aaKnown RBP8.27□□□□□ -1.09
USP54-207ENST00000451492 ZNF81P51508 661 aa8.27□□□□□ -1.09
USP54-207ENST00000451492 PPP1CBP62140 327 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms