RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 AQP6Q13520 282 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 PCK2Q16822 640 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 RBM48Q5RL73 367 aaKnown RBP12.81□□□□□ -0.36
SHANK2-210ENST00000449116 SHFQ7M4L6 423 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 DPY19L4Q7Z388 723 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 OR4F15Q8NGB8 312 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 NANOS1Q8WY41 292 aaKnown RBP12.81□□□□□ -0.36
SHANK2-210ENST00000449116 GGHQ92820 318 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 S100PBPQ96BU1 408 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
SHANK2-210ENST00000449116 YIPF3Q9GZM5 350 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 ACTR6Q9GZN1 396 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 OR10A4Q9H209 315 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 OBP2BQ9NPH6 170 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 SLC17A5Q9NRA2 495 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 CNOT2Q9NZN8 540 aaKnown RBP12.81□□□□□ -0.36
SHANK2-210ENST00000449116 ASH2LQ9UBL3 628 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 CYB5R1Q9UHQ9 305 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 PSORS1C1Q9UIG5 152 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 BLOC1S6Q9UL45 172 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 TPRKBQ9Y3C4 175 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 PCDHGB1Q9Y5G3 927 aa12.81□□□□□ -0.36
SHANK2-210ENST00000449116 ARPC4-TTLL3A0A0A6YYG9 625 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 EFCAB10A6NFE3 127 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 OR5H1A6NKK0 313 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 AGFG2O95081 481 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 UBL3O95164 117 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 FADS2O95864 444 aaKnown RBP12.8□□□□□ -0.36
SHANK2-210ENST00000449116 CRHBPP24387 322 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 CCKARP32238 428 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 RPS27P42677 84 aaKnown RBP12.8□□□□□ -0.36
SHANK2-210ENST00000449116 PCBD1P61457 104 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 TFF3Q07654 80 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 SLC36A2Q495M3 483 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 TIMM23BQ5SRD1 257 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 SLC18B1Q6NT16 456 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 SYT9Q86SS6 491 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 P2RY8Q86VZ1 359 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 CDC20BQ86Y33 519 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 LINC00346Q8IVM7 164 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 SLC35F2Q8IXU6 374 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF454Q8N9F8 522 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 OR52I1Q8NGK6 324 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 OR2AJ1Q8NGZ0 328 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 OTOSQ8NHW6 89 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 FBXO17Q96EF6 278 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 MNTQ99583 582 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 RHNO1Q9BSD3 238 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 YTHDF1Q9BYJ9 559 aaKnown RBP12.8□□□□□ -0.36
SHANK2-210ENST00000449116 CCNB1IP1Q9NPC3 277 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 FKBP14Q9NWM8 211 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF224Q9NZL3 707 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 LHFPL6Q9Y693 200 aa12.8□□□□□ -0.36
SHANK2-210ENST00000449116 WIPF3A6NGB9 483 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 J3QRE1 110 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 HLA-HP01893 362 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 PSKH1P11801 424 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF32P17041 273 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 ACTC1P68032 377 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 ACTA1P68133 377 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TUBA1BP68363 451 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TUBA4AP68366 448 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 SCRN3Q0VDG4 424 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 C1QTNF12Q5T7M4 302 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 AHSA2Q719I0 299 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TUBA1AQ71U36 451 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 WDR31Q8NA23 367 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 GJC3Q8NFK1 279 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 OR10H4Q8NGA5 316 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 OR2T27Q8NH04 317 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 FGFBP3Q8TAT2 258 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 SMAP2Q8WU79 429 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-210ENST00000449116 IPCEF1Q8WWN9 437 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 COPS4Q9BT78 406 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 RNF121Q9H920 327 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 FGF20Q9NP95 211 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-210ENST00000449116 LAMP5Q9UJQ1 280 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
SHANK2-210ENST00000449116 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 AMDHD2Q9Y303 409 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TIMM10BQ9Y5J6 103 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 TMEM14AQ9Y6G1 99 aa12.79□□□□□ -0.36
SHANK2-210ENST00000449116 A0A1W2PR80 420 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF503-AS2A6NEH8 195 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 ZNF670-ZNF695F2Z2N8 137 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 PHYHO14832 338 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 RAB36O95755 333 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 WNT11O96014 354 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 IGHA1P01876 353 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 LYNP07948 512 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
SHANK2-210ENST00000449116 PATE4P0C8F1 98 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 CD79AP11912 226 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 PPP3CBP16298 524 aa12.78□□□□□ -0.36
SHANK2-210ENST00000449116 ALOX5APP20292 161 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms