RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 LAX1Q8IWV1 398 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 SYS1Q8N2H4 156 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 KCNG3Q8TAE7 436 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 PPP1R14BQ96C90 147 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 DCLRE1CQ96SD1 692 aaKnown RBP6.69□□□□□ -1.34
SYNE1-213ENST00000448038 A0A1W2PQM1 296 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 PRICKLE3O43900 615 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-213ENST00000448038 B4GALT1P15291 398 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 HLA-DMAP28067 261 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 EGR3Q06889 387 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 C12orf73Q69YU5 71 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.69□□□□□ -1.34
SYNE1-213ENST00000448038 MRGPREQ86SM8 312 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 NOXO1Q8NFA2 376 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 SEMA6DQ8NFY4 1073 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 OR11L1Q8NGX0 322 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 COQ8AQ8NI60 647 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 OR51E1Q8TCB6 317 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 CMSS1Q9BQ75 279 aaKnown RBP6.69□□□□□ -1.34
SYNE1-213ENST00000448038 RAB9BQ9NP90 201 aa6.69□□□□□ -1.34
SYNE1-213ENST00000448038 CACNA1EQ15878 2313 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 NAP1L6A6NFF2 107 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 GUSBP08236 651 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 TOMM34Q15785 309 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CEACAM16Q2WEN9 425 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 RTL6Q6ICC9 239 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 WDR88Q6ZMY6 472 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 C9orf40Q8IXQ3 194 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 NKAIN3Q8N8D7 197 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 FAM181AQ8N9Y4 354 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 OR56B1Q8NGI3 324 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 IL1F10Q8WWZ1 152 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 GUCD1Q96NT3 240 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ATF6BQ99941 703 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 RHNO1Q9BSD3 238 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 SELENOIQ9C0D9 397 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 A0A1W2PQD3 144 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 OR5H15A6NDH6 313 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CPEP16870 476 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 GP2P55259 537 aaKnown RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 IKZF1Q13422 519 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ARSJQ5FYB0 599 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 EXOSC6Q5RKV6 272 aaKnown RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ASCC1Q8N9N2 400 aaKnown RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 OR52N5Q8NH56 324 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 MAN2C1Q9NTJ4 1040 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 GLTPQ9NZD2 209 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 DTX4Q9Y2E6 619 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CHD5Q8TDI0 1954 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 C5orf49A4QMS7 147 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 TNFRSF10AO00220 468 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 POU3F3P20264 500 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 HTR2AP28223 471 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CDAP32320 146 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 RAC1P63000 192 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CDK5Q00535 292 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 PXKQ7Z7A4 578 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 FAM71CQ8NEG0 241 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 OR51D1Q8NGF3 324 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 C11orf40Q8WZ69 217 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 TXNDC15Q96J42 360 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 MOB1AQ9H8S9 216 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 FGF20Q9NP95 211 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 GDF2Q9UK05 429 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 A0A1W2PQ09 198 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 DVL2O14641 736 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 SULT1C4O75897 302 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ANKRD34CP0C6C1 535 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 PET100P0DJ07 73 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 AKR1C2P52895 323 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CXADRP78310 365 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CD163Q86VB7 1156 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 RDH10Q8IZV5 341 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CCDC71LQ8N9Z2 235 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ZNF721Q8TF20 911 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 FAM3DQ96BQ1 224 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 RAB3CQ96E17 227 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 LIN7BQ9HAP6 207 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 C12orf10Q9HB07 376 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 CGGBP1Q9UFW8 167 aaPredicted RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 STEAP1Q9UHE8 339 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ITGB1BP2Q9UKP3 347 aa6.68□□□□□ -1.34
SYNE1-213ENST00000448038 EXO1Q9UQ84 846 aaKnown RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 ZFC3H1O60293 1989 aaKnown RBP6.68□□□□□ -1.34
SYNE1-213ENST00000448038 FGF5P12034 268 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 BLVRBP30043 206 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CASP3P42574 277 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 SLC17A1Q14916 467 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 DCAF10Q5QP82 559 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 DGAT2L6Q6ZPD8 337 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ELMOD2Q8IZ81 293 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 CMTM1Q8IZ96 169 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR5AS1Q8N127 324 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR4D11Q8NGI4 311 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR6M1Q8NGM8 313 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 OR10D3Q8NH80 312 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 HSPB11Q9Y547 144 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 LNP1A1A4G5 178 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 ZNF806P0C7X5 589 aa6.67□□□□□ -1.34
SYNE1-213ENST00000448038 EDN3P14138 238 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms