RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 INSM1Q01101 510 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MFGE8Q08431 387 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 DHRS2Q13268 280 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 OR2F1Q13607 317 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 NR0B2Q15466 257 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ACKR1Q16570 336 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MOB3CQ70IA8 216 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 PTX4Q96A99 478 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ADOQ96SZ5 270 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MAP3K3Q99759 626 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 ARPC5LQ9BPX5 153 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 BARX1Q9HBU1 254 aaPredicted RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 GTF2A1LQ9UNN4 478 aa17.17■□□□□ 0.34
SDCBP-204ENST00000447182 MRPS18BQ9Y676 258 aaKnown RBP17.17■□□□□ 0.34
SDCBP-204ENST00000447182 TMEM200CA6NKL6 621 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 H0YIG0 161 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 M0QYG6 137 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 RAD1O60671 282 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 ICOSLGO75144 302 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 OR6A2O95222 327 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 SPARCP09486 303 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 CTSEP14091 401 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 FZD2Q14332 565 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 C1QL3Q5VWW1 255 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 JMJD6Q6NYC1 403 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-204ENST00000447182 TMED4Q7Z7H5 227 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 ESX1Q8N693 406 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 RELL2Q8NC24 303 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-204ENST00000447182 ADIPOR1Q96A54 375 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 PTDSS2Q9BVG9 487 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 RTN4RQ9BZR6 473 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 TXNIPQ9H3M7 391 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 TAS2R4Q9NYW5 299 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF230Q9UIE0 474 aaPredicted RBP17.16■□□□□ 0.34
SDCBP-204ENST00000447182 TNFSF18Q9UNG2 199 aa17.16■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF736B4DX44 427 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 HCRTR2O43614 444 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 NUDT21O43809 227 aaKnown RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 SLC16A7O60669 478 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 IGHV4-34P06331 123 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 IL32P24001 234 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 OTPQ5XKR4 325 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 CHRDL2Q6WN34 429 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 METTL27Q8N6F8 245 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 OR1J2Q8NGS2 313 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 OR10K1Q8NGX5 313 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 ABHD6Q9BV23 337 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 B3GNT4Q9C0J1 378 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 LANCL2Q9NS86 450 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 SLC2A8Q9NY64 477 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 REV3LO60673 3130 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 LOC390937A0A1W2PQ73 354 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 LINC01565O15544 149 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 ALOX12BO75342 701 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 SRSF10O75494 262 aaKnown RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 IGHMP01871 453 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 HLA-GP17693 338 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 CD1CP29017 333 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 ADAM8P78325 824 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 PMPCAQ10713 525 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 C1orf61Q13536 156 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 TOMM34Q15785 309 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 C11orf87Q6NUJ2 197 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 BPIFB2Q8N4F0 458 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 OR13C8Q8NGS7 320 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 PHYHIPLQ96FC7 376 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 SLC25A44Q96H78 314 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 NKX3-1Q99801 234 aaPredicted RBP17.15■□□□□ 0.34
SDCBP-204ENST00000447182 GPR27Q9NS67 375 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 MSRAQ9UJ68 235 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 PLCL2Q9UPR0 1127 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 LRP12Q9Y561 859 aa17.15■□□□□ 0.34
SDCBP-204ENST00000447182 A0A1W2PQD3 144 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 KANTRA0A1W2PQU2 76 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 DXOO77932 396 aaKnown RBP17.14■□□□□ 0.33
SDCBP-204ENST00000447182 IGKV3-11P04433 115 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 CTLA4P16410 223 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 ACHEP22303 614 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 CD34P28906 385 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 FNTBP49356 437 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 ETFDHQ16134 617 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 C1orf100Q5SVJ3 147 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 LIN54Q6MZP7 749 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 FRMD1Q8N878 549 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 FBXW5Q969U6 566 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 FOXN4Q96NZ1 517 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 PNO1Q9NRX1 252 aaKnown RBP17.14■□□□□ 0.33
SDCBP-204ENST00000447182 CGGBP1Q9UFW8 167 aaPredicted RBP17.14■□□□□ 0.33
SDCBP-204ENST00000447182 B4DGG1 531 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 BCL2L11O43521 198 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 NPIPB7O75200 414 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 SLC25A12O75746 678 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 PLGP00747 810 aaPredicted RBP17.14■□□□□ 0.33
SDCBP-204ENST00000447182 APOC3P02656 99 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 GABRG2P18507 467 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 DRD1P21728 446 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 MPZP25189 248 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 EIF2B1Q14232 305 aaKnown RBP17.14■□□□□ 0.33
SDCBP-204ENST00000447182 MEF2DQ14814 521 aa17.14■□□□□ 0.33
SDCBP-204ENST00000447182 PHF19Q5T6S3 580 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms