RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 KLHL7Q8IXQ5 586 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TMEM99Q8N816 258 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 FAM76AQ8TAV0 307 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 NABP1Q96AH0 204 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ZNF669Q96BR6 464 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 HAVCR1Q96D42 359 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 GPR78Q96P69 363 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 NAT9Q9BTE0 207 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 MRPL1Q9BYD6 325 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 SLC22A4Q9H015 551 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 GMNCA6NCL1 334 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 OVOL1O14753 267 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TFPTP0C1Z6 253 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 NCBP2P52298 156 aaKnown RBP eCLIP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 RAB25P57735 213 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ERVS71-1P61550 626 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 MZT1Q08AG7 82 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 MFSD13AQ14CX5 517 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CXorf66Q5JRM2 361 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 SLC36A1Q7Z2H8 476 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CALHM1Q8IU99 346 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 PNPT1Q8TCS8 783 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 PIK3R3Q92569 461 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 RNF126Q9BV68 326 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 C20orf96Q9NUD7 363 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TMCO1Q9UM00 188 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 OOEPA6NGQ2 149 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 AIM2O14862 343 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CD74P04233 296 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 RAC2P15153 192 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CD1DP15813 335 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 MAPK1P28482 360 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 PMELP40967 661 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ARHGDIBP52566 201 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CLDN17P56750 224 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 WDR4P57081 412 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 BLCAPP62952 87 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 FASTKD3Q14CZ7 662 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TSNQ15631 228 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 KCTD19Q17RG1 926 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 FAM153CQ494X1 144 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ATPAF1Q5TC12 328 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 LRIG3Q6UXM1 1119 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 BAIAP2L2Q6UXY1 529 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 GTSCR1Q86UQ5 136 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 GLB1L2Q8IW92 636 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ZNF440Q8IYI8 595 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 SLC22A24Q8N4F4 322 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 OR4M1Q8NGD0 313 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 GIMAP5Q96F15 307 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 POM121L2Q96KW2 1035 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 NSUN5Q96P11 429 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 CPPED1Q9BRF8 314 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 THAP7Q9BT49 309 aaPredicted RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 ADPRHL2Q9NX46 363 aa4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TNPO3Q9Y5L0 923 aaKnown RBP4.88□□□□□ -1.63
BRAFP1-201ENST00000445336 TMEM72A0PK05 275 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 TMEM114B3SHH9 223 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 XRCC3O43542 346 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 CYB5R3P00387 301 aaPredicted RBP4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 IGHG1P01857 330 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 RBP4P02753 201 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ZSCAN5DPP0CG00 497 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 MUC1P15941 1255 aaPredicted RBP4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 CHI3L2Q15782 390 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 SPIN4Q56A73 249 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 SPRNQ5BIV9 151 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 CCDC91Q7Z6B0 441 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 THAP5Q7Z6K1 395 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 PLEKHA1Q9HB21 404 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 MRM2Q9UI43 246 aaKnown RBP4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 TLDC2A0PJX2 215 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 WDR91A4D1P6 747 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 A8MVM7 634 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 WISP3O95389 354 aaPredicted RBP4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ALDH9A1P49189 494 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ENTPD1P49961 510 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 GDI2P50395 445 aaKnown RBP4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 RWDD2BP57060 319 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 TMEM107Q6UX40 140 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 LRRC8AQ8IWT6 810 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ZNF563Q8TA94 476 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 RORBQ92753 470 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 TSPAN17Q96FV3 270 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 CCDC115Q96NT0 180 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 ULBP2Q9BZM5 246 aa4.87□□□□□ -1.63
BRAFP1-201ENST00000445336 NUP214P35658 2090 aaPredicted RBP4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 PCDH7O60245 1069 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 NPHS1O60500 1241 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 ARRB2P32121 409 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 ZNF75DP51815 510 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 RASA2Q15283 850 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 RBM20Q5T481 1227 aaKnown RBP4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 ANKRD26P1Q6NSI1 321 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 EMBQ6PCB8 327 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 GPAT4Q86UL3 456 aa4.86□□□□□ -1.63
BRAFP1-201ENST00000445336 PTP4A1Q93096 173 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms