RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GPRIN2O60269 458 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 FZD5Q13467 585 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CDONQ4KMG0 1287 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 UBAC2Q8NBM4 344 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 EXTL1Q92935 676 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 FUNDC2Q9BWH2 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 RIMS4Q9H426 269 aaPredicted RBP10.98□□□□□ -0.65
NEK1-201ENST00000439128 ZNF768Q9H5H4 540 aaKnown RBP10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A6P0DMU7 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A5P0DMU8 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A7P0DMV0 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A8P0DMV1 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A9P0DMV2 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 MAGEA5P43359 124 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 ZNF91Q05481 1191 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 ARL16Q0P5N6 197 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A2Q5DJT8 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A1Q5HYN5 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 ZDHHC23Q8IYP9 409 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 CT45A3Q8NHU0 189 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 NUDT8Q8WV74 236 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 TCTEX1D2Q8WW35 142 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 DCUN1D4Q92564 292 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 SUCNR1Q9BXA5 334 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 PPA2Q9H2U2 334 aa10.98□□□□□ -0.65
NEK1-201ENST00000439128 BRWD3Q6RI45 1802 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 MASP2O00187 686 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 NCR1O76036 304 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 CDK1P06493 297 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 Q499Y3 187 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 SERTAD4Q9NUC0 356 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 EXO1Q9UQ84 846 aaKnown RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 A0A0A6YYD5 115 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 GPR137BO60478 399 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 ITGAMP11215 1152 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 CPEP16870 476 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 SDHAP31040 664 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 RPS16P62249 146 aaKnown RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 PRSS41Q7RTY9 318 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 LSRQ86X29 649 aaPredicted RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 CHDHQ8NE62 594 aaPredicted RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 OR10D3Q8NH80 312 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 SHANK3Q9BYB0 1731 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 MARF1Q9Y4F3 1742 aaKnown RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 A0A1W2PQF6 199 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 OPRM1P35372 400 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 SHBQ15464 509 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 DCAF10Q5QP82 559 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 CNIH2Q6PI25 160 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 CYP4V2Q6ZWL3 525 aaPredicted RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 BHLHA15Q7RTS1 189 aaPredicted RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 TMEM171Q8WVE6 324 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 ANKRD9Q96BM1 317 aaPredicted RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 MRPS24Q96EL2 167 aaKnown RBP10.97□□□□□ -0.65
NEK1-201ENST00000439128 ATF6BQ99941 703 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 ASB1Q9Y576 335 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 FANCGO15287 622 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 NRASP01111 189 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 HOXB5P09067 269 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 S100PP25815 95 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 S100A2P29034 98 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 RAC1P63000 192 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 PLA1AQ53H76 456 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 PRSS42Q7Z5A4 293 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 ARIH2OSQ8N7S6 290 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 RDH5Q92781 318 aa10.97□□□□□ -0.65
NEK1-201ENST00000439128 HSPB2A8KAH6 182 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 M0R233 179 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 GABRPO00591 440 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 NKX2-8O15522 239 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 ETHE1O95571 254 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 APEHP13798 732 aaKnown RBP10.96□□□□□ -0.65
NEK1-201ENST00000439128 PCSK6P29122 969 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 C21orf33P30042 268 aaPredicted RBP10.96□□□□□ -0.65
NEK1-201ENST00000439128 HSPB2Q16082 182 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 PLPP7Q8NBV4 271 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 OR51A2Q8NGJ7 313 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 OR10J5Q8NHC4 309 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 GHSRQ92847 366 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 UBQLN3Q9H347 655 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 ABCA3Q99758 1704 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 GLAP06280 429 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 CDAP32320 146 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 RAB11AP62491 216 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 DPY19L2P1Q6NXN4 242 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 ZNF420Q8TAQ5 688 aaPredicted RBP10.96□□□□□ -0.65
NEK1-201ENST00000439128 FBXW5Q969U6 566 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 ALG14Q96F25 216 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 KCNJ15Q99712 375 aa10.96□□□□□ -0.65
NEK1-201ENST00000439128 MRPS18BQ9Y676 258 aaKnown RBP10.96□□□□□ -0.65
NEK1-201ENST00000439128 SLC9A3R2Q15599 337 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 MRGPREQ86SM8 312 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 MOB3BQ86TA1 216 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 ADAMTS14Q8WXS8 1223 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 CNRIP1Q96F85 164 aaPredicted RBP10.96□□□□□ -0.66
NEK1-201ENST00000439128 C20orf27Q9GZN8 174 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 OR51E2Q9H255 320 aa10.96□□□□□ -0.66
NEK1-201ENST00000439128 MYOZ1Q9NP98 299 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms