RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PLEK2Q9NYT0 353 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MTFP1Q9UDX5 166 aa6.08□□□□□ -1.44
CSDE1-205ENST00000438362 UBE2J1Q9Y385 318 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MRPS2Q9Y399 296 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 MAP1BP46821 2468 aaKnown RBP6.08□□□□□ -1.44
CSDE1-205ENST00000438362 A0A1B0GV50 99 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 PRSS37A4D1T9 235 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OR2W5A6NFC9 320 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 IMPA2O14732 288 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 HPXP02790 462 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ADRB1P08588 477 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ERGP11308 486 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 APEHP13798 732 aaKnown RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF136P52737 540 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 HTRA4P83105 476 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SSBP1Q04837 148 aaKnown RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FUT5Q11128 374 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM53BQ14153 422 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SLC36A2Q495M3 483 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OTPQ5XKR4 325 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OR10K2Q6IF99 312 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF687Q8N1G0 1237 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 DOCK4Q8N1I0 1966 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM181AQ8N9Y4 354 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ASB13Q8WXK3 278 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CCDC74AQ96AQ1 378 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MRGPRX1Q96LB2 322 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 RPS10P5Q9NQ39 176 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CACNA1IQ9P0X4 2223 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MGAMO43451 1857 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 LGALS8O00214 317 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 NUDT21O43809 227 aaKnown RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF254O75437 659 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MED6O75586 246 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 WDPCPO95876 746 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 PMP2P02689 132 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CFIP05156 583 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CT62P0C5K7 136 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MGMTP16455 207 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SERPINA2P20848 420 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CSNK1A1P48729 337 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 PPA1Q15181 289 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 C17orf107Q6ZR85 190 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM57BQ71RH2 274 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SSX6Q7RTT6 188 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MDGA2Q7Z553 956 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MR1Q95460 341 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SHDQ96IW2 340 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SMIM3Q9BZL3 60 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 DNTTIP1Q9H147 329 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MMP25Q9NPA2 562 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FLRT3Q9NZU0 649 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 RPH3AQ9Y2J0 694 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 LINC00862A6NCI5 91 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ERVH48-1M5A8F1 160 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 LCATP04180 440 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 SELENOPP49908 381 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 RIN1Q13671 783 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 PDSS1Q5T2R2 415 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 RTL6Q6ICC9 239 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 PWWP2BQ6NUJ5 590 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 H1FNTQ75WM6 255 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ST8SIA2Q92186 375 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 RSPRY1Q96DX4 576 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 BORCS8Q96FH0 119 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OR8B4Q96RC9 309 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CLCC1Q96S66 551 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 GHITMQ9H3K2 345 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 TXNIPQ9H3M7 391 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 UNKLQ9H9P5 680 aaKnown RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 KCNJ16Q9NPI9 418 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 B9D1Q9UPM9 204 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 HRH3Q9Y5N1 445 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ANKRD20A5PA0PJZ0 165 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MCRIP1C9JLW8 97 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 K7EPK0 472 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CBX7O95931 251 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 HLA-DQB1P01920 261 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF250P15622 560 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZP3P21754 424 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 GABRR1P24046 479 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 BLVRBP30043 206 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CDKN2AP42771 156 aaKnown RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 MESP2Q0VG99 397 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 HLXQ14774 488 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 LGALSLQ3ZCW2 172 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ZNF626Q68DY1 528 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 TMEM81Q6P7N7 255 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 GLIPR1L1Q6UWM5 242 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM122BQ7Z309 247 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FJX1Q86VR8 437 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 ADGRG3Q86Y34 549 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 CCDC71LQ8N9Z2 235 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OR10R2Q8NGX6 335 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OR52N5Q8NH56 324 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 OTOSQ8NHW6 89 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 FAM174AQ8TBP5 190 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 C4orf45Q96LM5 186 aa6.07□□□□□ -1.44
CSDE1-205ENST00000438362 LRRC3BQ96PB8 259 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms