RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 TO15178 435 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 FOLR1P15328 257 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 M6PRP20645 277 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GLO1Q04760 184 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 HLXQ14774 488 aaPredicted RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 C14orf28Q4W4Y0 310 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 LANCL3Q6ZV70 420 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 CATSPERDQ86XM0 798 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 OR1N1Q8NGS0 311 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 FAM174AQ8TBP5 190 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GPR119Q8TDV5 335 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 MVB12AQ96EY5 273 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 SLC25A44Q96H78 314 aaPredicted RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 NPAS1Q99742 590 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 VN1R1Q9GZP7 353 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 KCNN3Q9UGI6 736 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 SPEF1Q9Y4P9 236 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 MRPS18BQ9Y676 258 aaKnown RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 TEX51A0A1B0GUA7 166 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 B8ZZF3 427 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 LMO7DNF2Z398 122 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 F5H5P2 479 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 FADS1O60427 444 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 AHSA1O95433 338 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 CD2P06729 351 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GLULP15104 373 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 HTR2CP28335 458 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 S100A11P31949 105 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 PNLIPRP2P54317 469 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 CFHR1Q03591 330 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GLT8D1Q68CQ7 371 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 TMEM65Q6PI78 240 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 LRFN4Q6PJG9 635 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 ALKAL2Q6UX46 152 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GRINAQ7Z429 371 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GABRG1Q8N1C3 465 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 OR52N5Q8NH56 324 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 GPX8Q8TED1 209 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 RBPMSQ93062 196 aaKnown RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 SEH1LQ96EE3 360 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 ARL6Q9H0F7 186 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 POFUT1Q9H488 388 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 APMAPQ9HDC9 416 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 PRMT8Q9NR22 394 aaPredicted RBP10.6□□□□□ -0.71
CD44-209ENST00000433892 NUP50Q9UKX7 468 aa10.6□□□□□ -0.71
CD44-209ENST00000433892 SPAG17Q6Q759 2223 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 IGHV3-20A0A0C4DH32 117 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 POM121CA8CG34 1229 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 M0QYG6 137 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 ACSM4P0C7M7 580 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 MYF5P13349 255 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 MAP2K6P52564 334 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 FMODQ06828 376 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 SPOCK1Q08629 439 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 MFSD13AQ14CX5 517 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 KIF26BQ2KJY2 2108 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 WDR45BQ5MNZ6 344 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 TMUB2Q71RG4 321 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 LINC00346Q8IVM7 164 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 WDFY1Q8IWB7 410 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 JAGN1Q8N5M9 183 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 OR13C3Q8NGS6 347 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 RAB33BQ9H082 229 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 SLC17A5Q9NRA2 495 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 KIF25Q9UIL4 384 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 ABCA7Q8IZY2 2146 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 OR6C65A6NJZ3 312 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 METTL12A8MUP2 240 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 LMX1BO60663 402 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 ZNF217O75362 1048 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 IGFBP3P17936 291 aaPredicted RBP10.59□□□□□ -0.71
CD44-209ENST00000433892 CRABP1P29762 137 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 HOXD11P31277 338 aaPredicted RBP10.59□□□□□ -0.71
CD44-209ENST00000433892 SLC26A5P58743 744 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 ACTBP60709 375 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 HNRNPKP61978 463 aaKnown RBP eCLIP10.59□□□□□ -0.71
CD44-209ENST00000433892 ACTG1P63261 375 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 SMUG1Q53HV7 270 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 TSSK4Q6SA08 328 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 DCXRQ7Z4W1 244 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 TMED4Q7Z7H5 227 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 COQ8AQ8NI60 647 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 WBP1Q96G27 269 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 CMKLR1Q99788 373 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 MESP1Q9BRJ9 268 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 TINAGL1Q9GZM7 467 aaPredicted RBP10.59□□□□□ -0.71
CD44-209ENST00000433892 LMAN1LQ9HAT1 526 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 CTSFQ9UBX1 484 aa10.59□□□□□ -0.71
CD44-209ENST00000433892 FRYLO94915 3013 aa10.58□□□□□ -0.71
CD44-209ENST00000433892 VPS13AQ96RL7 3174 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 IGHV1OR21-1A0A087WYE8 117 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 LOC107986453A0A1B0GWG9 222 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
CD44-209ENST00000433892 HMSDA8MTL9 139 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms