RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 HSD17B8Q92506 261 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 PTX4Q96A99 478 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 LMF1Q96S06 567 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 POTEKPQ9BYX7 375 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 SLC26A1Q9H2B4 701 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 OR51J1Q9H342 316 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 FGF21Q9NSA1 209 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 NUDT15Q9NV35 164 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 KLHL13Q9P2N7 655 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 OR5V1Q9UGF6 321 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 STEAP1Q9UHE8 339 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 B9D1Q9UPM9 204 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 TMED7Q9Y3B3 224 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 AK6Q9Y3D8 172 aaKnown RBP6.68□□□□□ -1.34
COL17A1-204ENST00000433822 SPAG17Q6Q759 2223 aa6.68□□□□□ -1.34
COL17A1-204ENST00000433822 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 MEIKINA0A087WXM9 373 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 A0A0A6YYJ9 748 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SLC22A23A1A5C7 686 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 VSTM2BA6NLU5 285 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SNRPGP15A8MWD9 76 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 PRR32B1ATL7 298 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 B8ZZF3 427 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 H7C417 338 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 DCTN6O00399 190 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SLC17A2O00624 439 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 PLPP3O14495 311 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 XRCC3O43542 346 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF780AO75290 641 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SERPINI2O75830 405 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GLSO94925 669 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 AKR7A3O95154 331 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SYPP08247 313 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GSTP1P09211 210 aaKnown RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 CD3GP09693 182 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 FOLR1P15328 257 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 PSMB1P20618 241 aaKnown RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 PSMB10P40306 273 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 OR1D4P47884 311 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ARRB1P49407 418 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 HCCSP53701 268 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 OR1D5P58170 312 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 RNF4P78317 190 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GLO1Q04760 184 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 EIF3IQ13347 325 aaKnown RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ACKR1Q16570 336 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 COL28A1Q2UY09 1125 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ANKRD16Q6P6B7 361 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ASB18Q6ZVZ8 466 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 KANSL1Q7Z3B3 1105 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 HDDC2Q7Z4H3 204 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 LUZP2Q86TE4 346 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF227Q86WZ6 799 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 CDH26Q8IXH8 852 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SPICQ8N5J4 248 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 NKAIN3Q8N8D7 197 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF321PQ8N8H1 164 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GATSQ8NAP1 163 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 APCDD1LQ8NCL9 501 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF248Q8NDW4 579 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 NFAM1Q8NET5 270 aaPredicted RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 OR51L1Q8NGJ5 315 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 OR5L2Q8NGL0 311 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 OR6N2Q8NGY6 317 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GPR137Q96N19 417 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 GAL3ST4Q96RP7 486 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SYT4Q9H2B2 425 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SLCO5A1Q9H2Y9 848 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 HRASLSQ9HDD0 168 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 DHCR7Q9UBM7 475 aaKnown RBP6.67□□□□□ -1.34
COL17A1-204ENST00000433822 MTFP1Q9UDX5 166 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 KCNG2Q9UJ96 466 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 SCP2D1Q9UJQ7 156 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 B3GALT5Q9Y2C3 310 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 KLHDC2Q9Y2U9 406 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 B3GALT1Q9Y5Z6 326 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 MYO18BQ8IUG5 2567 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 DMXL2Q8TDJ6 3036 aa6.67□□□□□ -1.34
COL17A1-204ENST00000433822 LOC102725191A0A1B0GVB3 256 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 LOC390937A0A1W2PQ73 354 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 TUBAL3A6NHL2 446 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ACOD1A6NK06 481 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ANXA2P2A6NMY6 339 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 A8MU76 341 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 K7ESF4 209 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF593O00488 134 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SRSF10O75494 262 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 SCGNO76038 276 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 OR6A2O95222 327 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 CD2P06729 351 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ANXA2P07355 339 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 IFNGR1P15260 489 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 IGFBP3P17936 291 aaPredicted RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ADRA2CP18825 462 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 C4BPBP20851 252 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 ACHEP22303 614 aa6.66□□□□□ -1.34
COL17A1-204ENST00000433822 TCEA1P23193 301 aaKnown RBP6.66□□□□□ -1.34
COL17A1-204ENST00000433822 GIFP27352 417 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms