RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 APEX1P27695 318 aaKnown RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 CALCRP30988 508 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 CRISP1P54107 249 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 SCRN3Q0VDG4 424 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 DBPQ10586 325 aaPredicted RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 SNTB2Q13425 540 aaKnown RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 AQP6Q13520 282 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 DAG1Q14118 895 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 MEP1BQ16820 701 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 TMEM236Q5W0B7 351 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 UGT2A3Q6UWM9 527 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 FOXL2NBQ6ZUU3 175 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 OR4F15Q8NGB8 312 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 OR51L1Q8NGJ5 315 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 OR2AJ1Q8NGZ0 328 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 LILRB1Q8NHL6 650 aaPredicted RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 C11orf40Q8WZ69 217 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 PIGTQ969N2 578 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 RBM4BQ9BQ04 359 aaKnown RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 RBM4Q9BWF3 364 aaKnown RBP13.47□□□□□ -0.25
TREX1-201ENST00000433541 RACGAP1Q9H0H5 632 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 GABARAPL1Q9H0R8 117 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 RIBC2Q9H4K1 309 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 TIMM10BQ9Y5J6 103 aa13.47□□□□□ -0.25
TREX1-201ENST00000433541 IGLV1-36A0A0B4J1U3 117 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 FAM183AA6NL82 134 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 E7EQL1 145 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 PRR23D1E9PI22 279 aaPredicted RBP13.46□□□□□ -0.25
TREX1-201ENST00000433541 DOK2O60496 412 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 PRR23D2P0DMB1 279 aaPredicted RBP13.46□□□□□ -0.25
TREX1-201ENST00000433541 CCL2P13500 99 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 GDI2P50395 445 aaKnown RBP13.46□□□□□ -0.25
TREX1-201ENST00000433541 ESRRGP62508 458 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 TEKQ02763 1124 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
TREX1-201ENST00000433541 ACSM5Q6NUN0 579 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 B3GLCTQ6Y288 498 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 PARP8Q8N3A8 854 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 NINJ1Q92982 152 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 DHRS9Q9BPW9 319 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 OR2H1Q9GZK4 316 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 CXorf56Q9H5V9 222 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 MED20Q9H944 212 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 PLEK2Q9NYT0 353 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 TVP23BQ9NYZ1 205 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 ASH2LQ9UBL3 628 aa13.46□□□□□ -0.25
TREX1-201ENST00000433541 C5orf49A4QMS7 147 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 SGCEO43556 437 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 SMPD2O60906 423 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 ATE1O95260 518 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 SCG5P05408 212 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 MMP7P09237 267 aaPredicted RBP13.45□□□□□ -0.26
TREX1-201ENST00000433541 STOMP27105 288 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 FMO3P31513 532 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 HTR5AP47898 357 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 RPS7P62081 194 aaKnown RBP13.45□□□□□ -0.26
TREX1-201ENST00000433541 LSM6P62312 80 aaKnown RBP13.45□□□□□ -0.26
TREX1-201ENST00000433541 ADAM8P78325 824 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 PSG4Q00888 419 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 PTGES3Q15185 160 aaKnown RBP13.45□□□□□ -0.26
TREX1-201ENST00000433541 SNAPC1Q16533 368 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 KLHL12Q53G59 568 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 AGAP6Q5VW22 663 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 KDM4DQ6B0I6 523 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 ZNF774Q6NX45 483 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 ZBTB46Q86UZ6 589 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 PQLC1Q8N2U9 271 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 MUC15Q8N387 334 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 EME1Q96AY2 570 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 C9orf16Q9BUW7 83 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 OR51V1Q9H2C8 321 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 CA10Q9NS85 328 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 EIF3KQ9UBQ5 218 aaKnown RBP13.45□□□□□ -0.26
TREX1-201ENST00000433541 TEX15Q9BXT5 2789 aa13.45□□□□□ -0.26
TREX1-201ENST00000433541 EI24O14681 340 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 SURF4O15260 269 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 FAM157BP0CG42 384 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 GAAP10253 952 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 CLUP10909 449 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 SPI1P17947 270 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 CD53P19397 219 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 APOBEC3AP31941 199 aaPredicted RBP13.44□□□□□ -0.26
TREX1-201ENST00000433541 ART1P52961 327 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 RPS23P62266 143 aaKnown RBP13.44□□□□□ -0.26
TREX1-201ENST00000433541 CDK5Q00535 292 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 ZNF544Q6NX49 715 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 PLBD1Q6P4A8 553 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 TMEM154Q6P9G4 183 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 SYT9Q86SS6 491 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 ZNF584Q8IVC4 421 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 LINC00346Q8IVM7 164 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 SLC26A10Q8NG04 563 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 WACQ9BTA9 647 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 OSBPL10Q9BXB5 764 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 WNT5BQ9H1J7 359 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 SLC25A19Q9HC21 320 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 PDZD2O15018 2839 aa13.44□□□□□ -0.26
TREX1-201ENST00000433541 RTTNQ86VV8 2226 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms