RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 TPBGQ13641 420 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 TSTQ16762 297 aaKnown RBP16.08■□□□□ 0.16
HMGN1-206ENST00000431390 OR2A2Q6IF42 318 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF585AQ6P3V2 769 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 PLEKHG7Q6ZR37 379 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 ANKRD13BQ86YJ7 626 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 APH1AQ96BI3 265 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 SNRNP40Q96DI7 357 aaKnown RBP16.08■□□□□ 0.16
HMGN1-206ENST00000431390 FUNDC2Q9BWH2 189 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 RBM24Q9BX46 236 aaKnown RBP16.08■□□□□ 0.16
HMGN1-206ENST00000431390 NELFAQ9H3P2 528 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 CRLF2Q9HC73 371 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 TRIM36Q9NQ86 728 aa16.08■□□□□ 0.16
HMGN1-206ENST00000431390 CCDC160A6NGH7 325 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 FIGNL2A6NMB9 653 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 J3QLW9 94 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 SULT1C4O75897 302 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 HOXD4P09016 255 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 CPEP16870 476 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF19P17023 458 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 MSR1P21757 451 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 CDAP32320 146 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 RPS27P42677 84 aaKnown RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 TMBIM6P55061 237 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 OR12D2P58182 307 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 MRPS34P82930 218 aaKnown RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 GUSBP1Q15486 140 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 TSPO2Q5TGU0 170 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 VASH1Q7L8A9 365 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 KLBQ86Z14 1044 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 FAM57AQ8TBR7 257 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 HAVCR2Q8TDQ0 301 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 THEM6Q8WUY1 208 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 ALKBH3Q96Q83 286 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 TM9SF2Q99805 663 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 TTYH2Q9BSA4 534 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 CDADC1Q9BWV3 514 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 GPR35Q9HC97 309 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 RSL24D1Q9UHA3 163 aaKnown RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 CYB5R1Q9UHQ9 305 aa16.07■□□□□ 0.16
HMGN1-206ENST00000431390 PHF3Q92576 2039 aaKnown RBP16.07■□□□□ 0.16
HMGN1-206ENST00000431390 ARHGAP21Q5T5U3 1957 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 HSPB2A8KAH6 182 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 RPL36A-HNRNPH2H7BZ11 118 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 LALBAP00709 142 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 TPOP07202 933 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 TACSTD2P09758 323 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 NPR2P20594 1047 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 MRPL28Q13084 256 aaKnown RBP16.06■□□□□ 0.16
HMGN1-206ENST00000431390 EIF2B1Q14232 305 aaKnown RBP16.06■□□□□ 0.16
HMGN1-206ENST00000431390 HSPB2Q16082 182 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 SSX1Q16384 188 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 TP53I3Q53FA7 332 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 KCTD18Q6PI47 426 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-206ENST00000431390 NUFIP2Q7Z417 695 aaKnown RBP16.06■□□□□ 0.16
HMGN1-206ENST00000431390 P2RY8Q86VZ1 359 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 UFD1Q92890 307 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 NABP1Q96AH0 204 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 ISOC1Q96CN7 298 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 DOK1Q99704 481 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 BCL7BQ9BQE9 202 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 ABHD6Q9BV23 337 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 TTTY10Q9BZA0 68 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 ENPP5Q9UJA9 477 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 CACNA1DQ01668 2161 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 DOCK7Q96N67 2140 aa16.06■□□□□ 0.16
HMGN1-206ENST00000431390 MBD3L4A6NDZ8 208 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 MBD3L3A6NE82 208 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 MBD3L5A6NJ08 208 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 METTL15A6NJ78 407 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 TTLL8A6PVC2 850 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 PRR32B1ATL7 298 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 NOL3O60936 208 aaKnown RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 KRT33AO76009 404 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 KRT8P05787 483 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ABOP16442 354 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ROR2Q01974 943 aaKnown RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ROM1Q03395 351 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 GPR50Q13585 617 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 OTPQ5XKR4 325 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 RPTNQ6XPR3 784 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 FAM214BQ7L5A3 538 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 LINGO2Q7L985 606 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 FAM220AQ7Z4H9 259 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 CD163Q86VB7 1156 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 PHC2Q8IXK0 858 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ZNF100Q8IYN0 542 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 C9orf106Q8NAJ2 232 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 OR52N5Q8NH56 324 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 MBD3L2Q8NHZ7 208 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ST7LQ8TDW4 575 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 RAB2BQ8WUD1 216 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 PELI1Q96FA3 418 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 OR8B4Q96RC9 309 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 SLC7A10Q9NS82 523 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 ASF1BQ9NVP2 202 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 NDUFB11Q9NX14 153 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 GNG8Q9UK08 70 aa16.05■□□□□ 0.16
HMGN1-206ENST00000431390 EMC9Q9Y3B6 208 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms