RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 BAIAP2L2Q6UXY1 529 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 UBALD2Q8IYN6 164 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 RBPMSQ93062 196 aaKnown RBP7.3□□□□□ -1.24
HPS4-205ENST00000429411 SOSTQ9BQB4 213 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 MFRPQ9BY79 579 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 IFT46Q9NQC8 304 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 TAS2R3Q9NYW6 316 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 MRTO4Q9UKD2 239 aaKnown RBP7.3□□□□□ -1.24
HPS4-205ENST00000429411 PCDHGA5Q9Y5G8 931 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 TRAV1-2A0A0B4J238 106 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 ALG1L2C9J202 215 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 MASP2O00187 686 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 ICOSLGO75144 302 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 AFF3P51826 1226 aaKnown RBP7.3□□□□□ -1.24
HPS4-205ENST00000429411 RIDAP52758 137 aaKnown RBP7.3□□□□□ -1.24
HPS4-205ENST00000429411 DLX5P56178 289 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 FZD5Q13467 585 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 AANATQ16613 207 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 PWWP2BQ6NUJ5 590 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 ZCCHC12Q6PEW1 402 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 CFAP77Q6ZQR2 320 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 RHOUQ7L0Q8 258 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 FAM219AQ8IW50 185 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 SYS1Q8N2H4 156 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 OR11G2Q8NGC1 345 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 OR2G2Q8NGZ5 317 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 ELSPBP1Q96BH3 223 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 TMEM41AQ96HV5 264 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 CXorf58Q96LI9 332 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 TIMP4Q99727 224 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 FRRS1LQ9P0K9 344 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 MRM2Q9UI43 246 aaKnown RBP7.3□□□□□ -1.24
HPS4-205ENST00000429411 NUP50Q9UKX7 468 aa7.3□□□□□ -1.24
HPS4-205ENST00000429411 TMEM235A6NFC5 223 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 OR2AT4A6NND4 320 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 NPIPA5E9PKD4 350 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 F5H0A9 414 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 BET1O15155 118 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SC5DO75845 299 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RAB40ALP0C0E4 278 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 CD1CP29017 333 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RORAP35398 523 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 CXADRP78310 365 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KLF9Q13886 244 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 TM4SF20Q53R12 229 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 GLT8D1Q68CQ7 371 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KLHL24Q6TFL4 600 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC29A4Q7RTT9 530 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC16A9Q7RTY1 509 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 OR4S1Q8NGB4 309 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 ZNF417Q8TAU3 575 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC2A12Q8TD20 617 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RAB40AQ8WXH6 277 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 FAM3DQ96BQ1 224 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC25A38Q96DW6 304 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 AMELYQ99218 206 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SEMA6CQ9H3T2 930 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 FSCN3Q9NQT6 498 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 TAS2R4Q9NYW5 299 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 NPIPA1Q9UND3 350 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KIR2DS5A0A0G2JLQ3 304 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 A0A0G2JNG1 304 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 A0A1W2PPH5 198 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 C7orf66A4D0T2 115 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 PRR32B1ATL7 298 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SHISA8B8ZZ34 492 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 PRAMEF26H0Y7S4 382 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KIR2DS3K7RE56 304 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 PRAF2O60831 178 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 FAM157BP0CG42 384 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC2A5P22732 501 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SDHAP31040 664 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KIR2DS5Q14953 304 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 RBMS2Q15434 407 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 OR7A5Q15622 319 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 C2orf76Q3KRA6 126 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLC18B1Q6NT16 456 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KCTD18Q6PI47 426 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 ZNF584Q8IVC4 421 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 DND1Q8IYX4 353 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 OR10Z1Q8NGY1 313 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 TAAR8Q969N4 342 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KLHDC3Q9BQ90 382 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 C7orf50Q9BRJ6 194 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 CHST6Q9GZX3 395 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SDHAF2Q9NX18 166 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 EPHA6Q9UF33 1036 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 FOXJ3Q9UPW0 622 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 COA3Q9Y2R0 106 aaPredicted RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 TMEM14AQ9Y6G1 99 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 SLCO1B1Q9Y6L6 691 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 OBSL1O75147 1896 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 KANTRA0A1W2PQU2 76 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 EFCAB7A8K855 629 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 P2RY10O00398 339 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 OGG1O15527 345 aa7.29□□□□□ -1.24
HPS4-205ENST00000429411 HLA-AP01891 365 aaKnown RBP7.29□□□□□ -1.24
HPS4-205ENST00000429411 H2BFMP0C1H6 154 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms