RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF433Q8N7K0 673 aaPredicted RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF454Q8N9F8 522 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR2AJ1Q8NGZ0 328 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 THEM6Q8WUY1 208 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 IPCEF1Q8WWN9 437 aaPredicted RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 NANOS1Q8WY41 292 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SGCDQ92629 289 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 GGHQ92820 318 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 LRRC46Q96FV0 321 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 NR1H4Q96RI1 486 aaPredicted RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 YTHDF1Q9BYJ9 559 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 YIPF3Q9GZM5 350 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 KCNN2Q9H2S1 579 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 MARCH7Q9H992 704 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 PAK1IP1Q9NWT1 392 aaPredicted RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 ERVK-18Q9QC07 812 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 LAMP5Q9UJQ1 280 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 IKZF2Q9UKS7 526 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 KLHDC2Q9Y2U9 406 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 PCDHGB1Q9Y5G3 927 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SNX5Q9Y5X3 404 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 LHFPL6Q9Y693 200 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMEM14AQ9Y6G1 99 aa6.94□□□□□ -1.3
HMGA1P4-201ENST00000428643 SHANK1Q9Y566 2161 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 COL6A6A6NMZ7 2263 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 A0A1W2PQL4 384 aaPredicted RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 NKX2-6A6NCS4 301 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 MYL12BO14950 172 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 UBL3O95164 117 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 IGHA1P01876 353 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 MT-ND2P03891 347 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CDK1P06493 297 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 LYNP07948 512 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 RPSAP08865 295 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR2T7P0C7T2 308 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 PATE4P0C8F1 98 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 PSKH1P11801 424 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 DCKP27707 260 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CD79BP40259 229 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC15A1P46059 708 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 HCCSP53701 268 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 PCBD1P61457 104 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 LSM6P62312 80 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACTA2P62736 377 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACTG2P63267 376 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 SLC35A2P78381 396 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 SCRN3Q0VDG4 424 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 AQP6Q13520 282 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 GABRA6Q16445 453 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 SFRP5Q5T4F7 317 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 FAM27BQ5VT28 67 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR7E24Q6IFN5 339 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ALKBH2Q6NS38 261 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMEM53Q6P2H8 277 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF773Q6PK81 442 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF322Q6U7Q0 402 aaPredicted RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 STAC2Q6ZMT1 411 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CFAP77Q6ZQR2 320 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF627Q7L945 461 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 DCXRQ7Z4W1 244 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CDC20BQ86Y33 519 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 SKA3Q8IX90 412 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 C17orf78Q8N4C9 275 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 RFLNBQ8N5W9 214 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACBD7Q8N6N7 88 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 STEAP2Q8NFT2 490 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR52N5Q8NH56 324 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 LILRB4Q8NHJ6 448 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 OTOSQ8NHW6 89 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ASB17Q8WXJ9 295 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 BCL2L2Q92843 193 aaPredicted RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 S100PBPQ96BU1 408 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 FBXO17Q96EF6 278 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRPL48Q96GC5 212 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 TMEM80Q96HE8 168 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 MNTQ99583 582 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ABHD6Q9BV23 337 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ALG8Q9BVK2 526 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ACTR6Q9GZN1 396 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 DUSP21Q9H596 190 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ZNF696Q9H7X3 374 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 RNF121Q9H920 327 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 FGF20Q9NP95 211 aaPredicted RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 KCNJ16Q9NPI9 418 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 INPP5EQ9NRR6 644 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 MRPS18AQ9NVS2 196 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 FKBP14Q9NWM8 211 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CHCHD3Q9NX63 227 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 ELOVL5Q9NYP7 299 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 CYB5R1Q9UHQ9 305 aa6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 EXOGQ9Y2C4 368 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 EXOSC1Q9Y3B2 195 aaKnown RBP6.93□□□□□ -1.3
HMGA1P4-201ENST00000428643 A0A1W2PR80 420 aa6.92□□□□□ -1.3
HMGA1P4-201ENST00000428643 OR5H1A6NKK0 313 aa6.92□□□□□ -1.3
HMGA1P4-201ENST00000428643 C16orf97H3BN30 126 aa6.92□□□□□ -1.3
HMGA1P4-201ENST00000428643 J3QRE1 110 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms