RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TNFRSF13CQ96RJ3 184 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 DDA1Q9BW61 102 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SCP2D1Q9UJQ7 156 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 PLEKHA6Q9Y2H5 1048 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 NOP16Q9Y3C1 178 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SIP14410 1827 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TRAV36DV7A0A075B6V5 113 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 C5orf51A6NDU8 294 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SURF4O15260 269 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF432O94892 652 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TCRBP04435 133 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SNRPBP14678 240 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 COX6B1P14854 86 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ACP1P24666 158 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TEKQ02763 1124 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 TRAM1Q15629 374 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 USF2Q15853 346 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 HYAL4Q2M3T9 481 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 FAM69AQ5T7M9 428 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 RBMS3Q6XE24 437 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 MEPCEQ7L2J0 689 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SSX6Q7RTT6 188 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 GPR32P1Q8NGA4 272 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 PIGCQ92535 297 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 LIN37Q96GY3 246 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 C7orf50Q9BRJ6 194 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 SIDT1Q9NXL6 827 aaKnown RBP9.65□□□□□ -0.86
TCOF1-204ENST00000427724 ZNF337Q9Y3M9 751 aa9.65□□□□□ -0.86
TCOF1-204ENST00000427724 LRRTM2O43300 516 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 LGI1O95970 557 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 RLN2P04090 185 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 FABP6P51161 128 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 GPR176Q14439 515 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 RAB35Q15286 201 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF793Q6ZN11 406 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 LRRC28Q86X40 367 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF417Q8TAU3 575 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 HOXB13Q92826 284 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF587Q96SQ5 575 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-204ENST00000427724 PLA2G12AQ9BZM1 189 aa9.65□□□□□ -0.87
TCOF1-204ENST00000427724 PRMT8Q9NR22 394 aaPredicted RBP9.65□□□□□ -0.87
TCOF1-204ENST00000427724 PSME4Q14997 1843 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 F8W036 122 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 PGAM2P15259 253 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 APOBEC1P41238 236 aaKnown RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 BLOC1S1P78537 153 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 TIGD3Q6B0B8 471 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 CAMKMTQ7Z624 323 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 OR11L1Q8NGX0 322 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 TIMD4Q96H15 378 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ARHGEF17Q96PE2 2063 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 USF3Q68DE3 2245 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 FASNP49327 2511 aaKnown RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 MYO16Q9Y6X6 1858 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 A0A0A6YYJ9 748 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 LOC101059948A0A1B0GTJ6 334 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 TRDV1A0A1B0GX56 115 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 GLSO94925 669 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ITGB2P05107 769 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ZNF14P17017 642 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 VAMP1P23763 118 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ETV6P41212 452 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 POGLUT1Q8NBL1 392 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 DEFB108BQ8NET1 73 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 BBS1Q8NFJ9 593 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 OR2V1Q8NHB1 315 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 PPP1R35Q8TAP8 253 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ABHD17AQ96GS6 310 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 RASL10BQ96S79 203 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 STACQ99469 402 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 C12orf57Q99622 126 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 UBQLN3Q9H347 655 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 OR14J1Q9UGF5 321 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 A0A1W2PR80 420 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 PRAMEF27A3QJZ7 478 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 M0R036 132 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 NPR2P20594 1047 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 MAGEA5P43359 124 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 C19orf57Q0VDD7 668 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 CRMP1Q14194 572 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 GK2Q14410 553 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 H1FNTQ75WM6 255 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 GDF7Q7Z4P5 450 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 MDGA2Q7Z553 956 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ARMC10Q8N2F6 343 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 OR6M1Q8NGM8 313 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 FBXW5Q969U6 566 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 S100PBPQ96BU1 408 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 MFFQ9GZY8 342 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 UCK1Q9HA47 277 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 HINT3Q9NQE9 182 aaKnown RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 MYEF2Q9P2K5 600 aaKnown RBP9.64□□□□□ -0.87
TCOF1-204ENST00000427724 ASB4Q9Y574 426 aa9.64□□□□□ -0.87
TCOF1-204ENST00000427724 TMEM129A0AVI4 362 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 AGAP14A8MT82 685 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 TXNL1O43396 289 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 SOD1P00441 154 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 TMIGD3P0DMS9 266 aaPredicted RBP9.63□□□□□ -0.87
TCOF1-204ENST00000427724 CPEP16870 476 aa9.63□□□□□ -0.87
TCOF1-204ENST00000427724 KLRB1Q12918 225 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms