RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HSPB2Q16082 182 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 TSPO2Q5TGU0 170 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 ZNF585AQ6P3V2 769 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 CORO6Q6QEF8 472 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 LRRN1Q6UXK5 716 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 APH1AQ96BI3 265 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 GMPPAQ96IJ6 420 aaPredicted RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 ALKBH3Q96Q83 286 aaPredicted RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 AMELYQ99218 206 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 LINC00470Q9BZP3 86 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 SLCO1C1Q9NYB5 712 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 PTTG2Q9NZH5 202 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 CLCF1Q9UBD9 225 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 SF3B6Q9Y3B4 125 aaKnown RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 GRIP1Q9Y3R0 1128 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 PHF3Q92576 2039 aaKnown RBP13.34□□□□□ -0.27
GINS3-203ENST00000426538 NCOR2Q9Y618 2525 aa13.34□□□□□ -0.27
GINS3-203ENST00000426538 PRRC2CQ9Y520 2896 aaKnown RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 A0A1W2PPW3 197 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 PRR32B1ATL7 298 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 OGG1O15527 345 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 GPX5O75715 221 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 CD53P19397 219 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 PSMB10P40306 273 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 TGM4P49221 684 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 RPS25P62851 125 aaKnown RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 ROM1Q03395 351 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 NFATC3Q12968 1075 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 TRAM1Q15629 374 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 SPATC1Q76KD6 591 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 CISD2Q8N5K1 135 aaKnown RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 ST7LQ8TDW4 575 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 ZNF837Q96EG3 531 aaPredicted RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 CENPOQ9BU64 300 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 ELOVL3Q9HB03 270 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 GPR35Q9HC97 309 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 CENPMQ9NSP4 180 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 ASH2LQ9UBL3 628 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 GSTK1Q9Y2Q3 226 aa13.33□□□□□ -0.27
GINS3-203ENST00000426538 SIRT4Q9Y6E7 314 aaPredicted RBP13.33□□□□□ -0.27
GINS3-203ENST00000426538 ZNF254O75437 659 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 IGHV3-9P01782 118 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 GABRA1P14867 456 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 PCSK6P29122 969 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 AGTR1P30556 359 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
GINS3-203ENST00000426538 ROR2Q01974 943 aaKnown RBP13.33□□□□□ -0.28
GINS3-203ENST00000426538 AQP6Q13520 282 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 SPCS2Q15005 226 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 CDK5R1Q15078 307 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 CEACAM16Q2WEN9 425 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 DMKNQ6E0U4 476 aaPredicted RBP13.33□□□□□ -0.28
GINS3-203ENST00000426538 DEGS2Q6QHC5 323 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 FOXL2NBQ6ZUU3 175 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 UBE2J2Q8N2K1 259 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 LRRC18Q8N456 261 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 MS4A15Q8N5U1 240 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 Q8NA96 180 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 HTRA1Q92743 480 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 GHSRQ92847 366 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 WNT2BQ93097 391 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 SMIM19Q96E16 107 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 COQ7Q99807 217 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 ZNF416Q9BWM5 594 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 SIAEQ9HAT2 523 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 SLC7A10Q9NS82 523 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 ST6GALNAC2Q9UJ37 374 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.28
GINS3-203ENST00000426538 LHFPL6Q9Y693 200 aa13.33□□□□□ -0.28
GINS3-203ENST00000426538 BOD1L1Q8NFC6 3051 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 TRIM64BA6NI03 449 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 ZNF587BE7ETH6 402 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 LRRTM2O43300 516 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 ABHD16AO95870 558 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 TPOP07202 933 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 GDI2P50395 445 aaKnown RBP13.32□□□□□ -0.28
GINS3-203ENST00000426538 SOWAHCQ53LP3 525 aaPredicted RBP13.32□□□□□ -0.28
GINS3-203ENST00000426538 FAM27BQ5VT28 67 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 OR2A2Q6IF42 318 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 ZNF544Q6NX49 715 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 USP43Q70EL4 1123 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 NUFIP2Q7Z417 695 aaKnown RBP13.32□□□□□ -0.28
GINS3-203ENST00000426538 GJC3Q8NFK1 279 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 SLAMF6Q96DU3 332 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 FOXB1Q99853 325 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 HDHD5Q9BXW7 423 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 C12orf49Q9H741 205 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 CACNA1GO43497 2377 aa13.32□□□□□ -0.28
GINS3-203ENST00000426538 TRDV1A0A1B0GX56 115 aa13.31□□□□□ -0.28
GINS3-203ENST00000426538 WDR1O75083 606 aa13.31□□□□□ -0.28
GINS3-203ENST00000426538 SS18L1O75177 396 aaPredicted RBP13.31□□□□□ -0.28
GINS3-203ENST00000426538 CD1AP06126 327 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms