RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LCN10Q6JVE6 187 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 RTN4RL2Q86UN3 420 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 DEFB123Q8N688 67 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 TMEM185AQ8NFB2 350 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 OR1J2Q8NGS2 313 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ZNF578Q96N58 590 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 NPAS1Q99742 590 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 MMP25Q9NPA2 562 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 NPIPA1Q9UND3 350 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 TNRC6BQ9UPQ9 1833 aaKnown RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 LOC101059948A0A1B0GTJ6 334 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 MPIG6BO95866 241 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 KNG1P01042 644 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 RLN2P04090 185 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 SULT1A3P0DMM9 295 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 SULT1A4P0DMN0 295 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 S100A11P31949 105 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 CDAP32320 146 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 TSFMP43897 325 aaKnown RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 CEBPGP53567 150 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ZNF74Q16587 644 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 GSG1LQ6UXU4 331 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 GALNT16Q8N428 558 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 SHDQ96IW2 340 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 LYRM4Q9HD34 91 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 PCDH15Q96QU1 1955 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 KIR2DS5A0A0G2JLQ3 304 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 A0A0G2JNG1 304 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ZNF705EA8MWA4 302 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 KIR2DS3K7RE56 304 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 SDCBPO00560 298 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 FOXS1O43638 330 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 AK1P00568 194 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 PMP2P02689 132 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 H2BFMP0C1H6 154 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 C4BPBP20851 252 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 RIDAP52758 137 aaKnown RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 KIR2DS5Q14953 304 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 MOGAT2Q3SYC2 334 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 FHL5Q5TD97 284 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ZNF584Q8IVC4 421 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 NT5CQ8TCD5 201 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ARL5BQ96KC2 179 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ST6GALNAC5Q9BVH7 336 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 SEMA6CQ9H3T2 930 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 A0A1W2PNR3 127 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 ZNF736B4DX44 427 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 SUSD5O60279 629 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SC5DO75845 299 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 HCKP08631 526 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SMIM10L1P0DMW3 83 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 IFNGR1P15260 489 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 NME1P15531 152 aaKnown RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 SNU13P55769 128 aaKnown RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 SEC61A1P61619 476 aaKnown RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 ZNF117Q03924 483 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 CDONQ4KMG0 1287 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 ARSKQ6UWY0 536 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 PXKQ7Z7A4 578 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 ST8SIA4Q92187 359 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SMIM10Q96HG1 83 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SMIM3Q9BZL3 60 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 PCED1AQ9H1Q7 454 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 FBXL21Q9UKT6 434 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 MED19A0JLT2 244 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 SFTPBP07988 381 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 BCKDHBP21953 392 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 MAPK3P27361 379 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 DPP4P27487 766 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SDHAP31040 664 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 CAPZA1P52907 286 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 DLX5P56178 289 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 BDH1Q02338 343 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 DMWDQ09019 674 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 PRTGQ2VWP7 1150 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 SLC39A1Q9NY26 324 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 POMT2Q9UKY4 750 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 TMEM82A0PJX8 343 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 J3QRE1 110 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 TOR1AO14656 332 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 LYPD3O95274 346 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 GNB3P16520 340 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 CD38P28907 300 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 FOXK1P85037 733 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 RBMS2Q15434 407 aaKnown RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 EXOSC6Q5RKV6 272 aaKnown RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 TMEM65Q6PI78 240 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 OVCH1Q7RTY7 1134 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 PAQR8Q8TEZ7 354 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 DHRS9Q9BPW9 319 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 TRAF4Q9BUZ4 470 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 CHMP1AQ9HD42 196 aaPredicted RBP12.05□□□□□ -0.48
USP42-203ENST00000426246 HPF1Q9NWY4 346 aa12.05□□□□□ -0.48
USP42-203ENST00000426246 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms