RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 HIST1H2ABP04908 130 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 HOXB9P17482 250 aaPredicted RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 STOMP27105 288 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 AQP1P29972 269 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MMP15P51511 669 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZNF154Q13106 437 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 SCARB2Q14108 478 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 FLOT2Q14254 428 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZMAT1Q5H9K5 638 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 SPATA46Q5T0L3 261 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 THEM4Q5T1C6 240 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 DPP10Q8N608 796 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 HIPK4Q8NE63 616 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MCHR2Q969V1 340 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 C1orf147Q96MC9 270 aaPredicted RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 DIRC2Q96SL1 478 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MCHR1Q99705 422 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 CCNB1IP1Q9NPC3 277 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MMP26Q9NRE1 261 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZNF229Q9UJW7 825 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZDHHC8Q9ULC8 765 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 NPTNQ9Y639 398 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZSCAN5BA6NJL1 495 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 FXYD1O00168 92 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ADH4P08319 380 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 MMP7P09237 267 aaPredicted RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 UMPSP11172 480 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 TRIM25Q14258 630 aaKnown RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 PABPC1L2AQ5JQF8 200 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 TTC33Q6PID6 262 aaPredicted RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 LINC00114Q6XXX2 140 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 HDDC2Q7Z4H3 204 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 NANOGNBQ7Z5D8 188 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ARPINQ7Z6K5 226 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 C1orf174Q8IYL3 243 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZNF101Q8IZC7 436 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 BCL6BQ8N143 479 aaPredicted RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 KLHL36Q8N4N3 616 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 SLC26A7Q8TE54 656 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 NRG4Q8WWG1 115 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 GEMIN6Q8WXD5 167 aaKnown RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
PUDP-203ENST00000424830 ZNF347Q96SE7 839 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 WFDC6Q9BQY6 131 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 SLC19A3Q9BZV2 496 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 TMEM38AQ9H6F2 299 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 SLC25A37Q9NYZ2 338 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 CORO2BQ9UQ03 480 aa13.64□□□□□ -0.23
PUDP-203ENST00000424830 PRKDCP78527 4128 aaKnown RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 C5orf49A4QMS7 147 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 H3BNX3 289 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 M0R3H8 397 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 KPNA4O00629 521 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 SBK2P0C263 348 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 HSD17B1P14061 328 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 MPV17P39210 176 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 SLC7A2P52569 658 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 MS4A2Q01362 244 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 SLC9A3R2Q15599 337 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 HIST3H3Q16695 136 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 KLF17Q5JT82 389 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 LRIF1Q5T3J3 769 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 MBNL2Q5VZF2 373 aaKnown RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 LEG1Q6P5S2 330 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 DHDDSQ86SQ9 333 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 C10orf111Q8N326 155 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 NOXO1Q8NFA2 376 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 SLC25A40Q8TBP6 338 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 KLF14Q8TD94 323 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 DUS3LQ96G46 650 aaKnown RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 ZNF48Q96MX3 618 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 DCLRE1CQ96SD1 692 aaKnown RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 OR2J1Q9GZK6 312 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 MS4A7Q9GZW8 240 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 MUC13Q9H3R2 512 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 SIAEQ9HAT2 523 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 ANGPT4Q9Y264 503 aa13.63□□□□□ -0.23
PUDP-203ENST00000424830 POLR3KQ9Y2Y1 108 aaPredicted RBP13.63□□□□□ -0.23
PUDP-203ENST00000424830 A0A1W2PRG6 482 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 CPSF4LA6NMK7 179 aaKnown RBP13.62□□□□□ -0.23
PUDP-203ENST00000424830 CENPBD1B2RD01 187 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 CASQ2O14958 399 aaPredicted RBP13.62□□□□□ -0.23
PUDP-203ENST00000424830 IGHV2-70P01814 119 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 CD55P08174 381 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 ZNF12P17014 697 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 WNT5AP41221 380 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 MTNR1AP48039 350 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 GDI2P50395 445 aaKnown RBP13.62□□□□□ -0.23
PUDP-203ENST00000424830 NFYCQ13952 458 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 MSRB3Q8IXL7 192 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 ABHD4Q8TB40 342 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 PYDC1Q8WXC3 89 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 DNAJC9Q8WXX5 260 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 POM121L2Q96KW2 1035 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 VCX3BQ9H321 246 aa13.62□□□□□ -0.23
PUDP-203ENST00000424830 OR5V1Q9UGF6 321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms