RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FAM157AC9JC47 383 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 NPIPB4C9JG80 1138 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 SYNGR3O43761 229 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 NCR1O76036 304 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 PPP1R3DO95685 299 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 CCL2P13500 99 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 CCNOP22674 350 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 IFNGR2P38484 337 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ALDH3B1P43353 468 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 LIMS1P48059 325 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 CENPAP49450 140 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 DVL1P1P54792 670 aaPredicted RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 LMO4P61968 165 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 HSF2Q03933 536 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 PLP2Q04941 152 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 MAD2L1BPQ15013 274 aaPredicted RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 MESTQ5EB52 335 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 THEM4Q5T1C6 240 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 C10orf128Q5T292 105 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 THSD4Q6ZMP0 1018 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ZER1Q7Z7L7 766 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 SPATA24Q86W54 205 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 PAQR4Q8N4S7 273 aaPredicted RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 ICA1LQ8NDH6 482 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 OR9Q2Q8NGE9 314 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ZNF519Q8TB69 540 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 GNPDA2Q8TDQ7 276 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ERMAPQ96PL5 475 aaPredicted RBP11.1□□□□□ -0.63
VRK3-203ENST00000424804 GPA33Q99795 319 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 CDH20Q9HBT6 801 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 U3KQV3 271 aa11.1□□□□□ -0.63
VRK3-203ENST00000424804 ARHGAP32A7KAX9 2087 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 VSTM5A8MXK1 200 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 PTP4A3O75365 173 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 RP2O75695 350 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 CCNB2O95067 398 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 HNF1AP20823 631 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 LAP3P28838 519 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 RPS6KA3P51812 740 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 FLOT2Q14254 428 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 OTPQ5XKR4 325 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SLC25A47Q6Q0C1 308 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SMARCD3Q6STE5 483 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
VRK3-203ENST00000424804 RFLNBQ8N5W9 214 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SLC30A7Q8NEW0 376 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 FNDC8Q8TC99 324 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SAMD8Q96LT4 415 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 BTBD10Q9BSF8 475 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 FUZQ9BT04 418 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 OR52D1Q9H346 318 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 MAGIXQ9H6Y5 334 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 REEP1Q9H902 201 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SIAEQ9HAT2 523 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SMURF2Q9HAU4 748 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 FZR1Q9UM11 496 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 SAMHD1Q9Y3Z3 626 aaKnown RBP11.09□□□□□ -0.63
VRK3-203ENST00000424804 SPEF1Q9Y4P9 236 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 UGT2A1Q9Y4X1 527 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 LYVE1Q9Y5Y7 322 aa11.09□□□□□ -0.63
VRK3-203ENST00000424804 DYSFO75923 2080 aa11.08□□□□□ -0.63
VRK3-203ENST00000424804 SLC22A23A1A5C7 686 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 M0R233 179 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 GNGT2O14610 69 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 IMPA2O14732 288 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 DNAJC8O75937 253 aaPredicted RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 KRT36O76013 467 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 VENTXO95231 258 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 CLPTM1O96005 669 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 SERPINA5P05154 406 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 FAM157BP0CG42 384 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 ZNF32P17041 273 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 NOS3P29474 1203 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 SDHAP31040 664 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 SLC6A6P31641 620 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 APLNRP35414 380 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 MRPS34P82930 218 aaKnown RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 TRAP1Q12931 704 aaKnown RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 CCNIQ14094 377 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 CLEC12AQ5QGZ9 265 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 OR2T5Q6IEZ7 315 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 PGBD2Q6P3X8 592 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 DPY19L2P2Q6ZN68 376 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 C1orf229Q6ZS94 237 aaPredicted RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 JAZF1Q86VZ6 243 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 OR2T29Q8NH02 315 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 AKR7LQ8NHP1 331 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 NMD3Q96D46 503 aaKnown RBP11.08□□□□□ -0.64
VRK3-203ENST00000424804 SYT4Q9H2B2 425 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 MS4A5Q9H3V2 200 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 EMC7Q9NPA0 242 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 NRIP3Q9NQ35 241 aa11.08□□□□□ -0.64
VRK3-203ENST00000424804 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms