RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 RNF122Q9H9V4 155 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 KCNE1BA0A087WTH5 132 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 MKRN2OSH3BPM6 223 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 SULT2B1O00204 365 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 SPINT1O43278 529 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 BCL6P41182 706 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 CDRT4Q8N9R6 151 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 NUP43Q8NFH3 380 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 CCL4L1Q8NHW4 92 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 TECTBQ96PL2 329 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 WWTR1Q9GZV5 400 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 SLITRK2Q9H156 845 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 RYDENQ9NUL5 291 aaKnown RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 PILRBQ9UKJ0 227 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 FLVCR2Q9UPI3 526 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 PRR33A8MZF0 331 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 KCNK5O95279 499 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 WISP3O95389 354 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 GAAP10253 952 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 GUCA1AP43080 201 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 EMP2P54851 167 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 TAS2R41P59536 307 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 RAB1AP62820 205 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 JMJD6Q6NYC1 403 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 WDR74Q6RFH5 385 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 NPSR1Q6W5P4 371 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 FAM131CQ96AQ9 280 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 OR1F2PQ96R84 312 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 EPYCQ99645 322 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 RHOFQ9HBH0 211 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 UPB1Q9UBR1 384 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 IL19Q9UHD0 177 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 KCND3Q9UK17 655 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 A0A0A6YYH2 397 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 A6NJ64 397 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 BCL2L11O43521 198 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 OR6A2O95222 327 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 TMIGD3P0DMS9 266 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 PVRP15151 417 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 ACAA2P42765 397 aaKnown RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 MELKQ14680 651 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
USP54-205ENST00000424265 DEFB110Q30KQ9 67 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 GLB1L2Q8IW92 636 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 OR52L1Q8NGH7 329 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 OR51S1Q8NGJ8 323 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 ADIPOR1Q96A54 375 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 PNPLA2Q96AD5 504 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 ZNF583Q96ND8 569 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 DEFB126Q9BYW3 111 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 ADAM19Q9H013 955 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 A4GNTQ9UNA3 340 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 CHST2Q9Y4C5 530 aa8.93□□□□□ -0.98
USP54-205ENST00000424265 ZNF860A6NHJ4 632 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 SCDO00767 359 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 GOSR1O95249 250 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 SERPINA5P05154 406 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 NKG7Q16617 165 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 SLC23A3Q6PIS1 610 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 UNQ6126/PRO20091Q6UXV3 157 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ZNF687Q8N1G0 1237 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OR10AD1Q8NGE0 317 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OR4D9Q8NGE8 314 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OR8U1Q8NH10 309 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ORAI1Q96D31 301 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ACTRT3Q9BYD9 372 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 TBL1XR1Q9BZK7 514 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RAB33BQ9H082 229 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 PRDM13Q9H4Q3 707 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 CCDC187A0A096LP49 1063 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RNASEK-C17orf49H0YIS7 233 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RDH16O75452 317 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RPA2P15927 270 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 WNT4P56705 351 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ISXQ2M1V0 245 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 NKAIN2Q5VXU1 208 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 UBE3DQ7Z6J8 389 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 ZFP41Q8N8Y5 198 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 FAM71CQ8NEG0 241 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 RELTQ969Z4 430 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 FOXJ2Q9P0K8 574 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 CHRNA9Q9UGM1 479 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 CLEC2DQ9UHP7 191 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OR2F2O95006 317 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 XCR1P46094 333 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 TDGF1P3P51864 188 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 PJVKQ0ZLH3 352 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 OR2F1Q13607 317 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 IL11RAQ14626 422 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 NSDHLQ15738 373 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 IQCJQ1A5X6 159 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 WDR73Q6P4I2 378 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 TNFAIP8L2Q6P589 184 aaPredicted RBP8.92□□□□□ -0.98
USP54-205ENST00000424265 UNQ6494/PRO21346Q6UXR6 183 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 BAP18Q8IXM2 172 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 FAM98AQ8NCA5 519 aaKnown RBP8.92□□□□□ -0.98
USP54-205ENST00000424265 SMIM12Q96EX1 92 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 WBP1Q96G27 269 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 GABARAPL3Q9BY60 117 aa8.92□□□□□ -0.98
USP54-205ENST00000424265 LANCL2Q9NS86 450 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms