RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 EGR3Q06889 387 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 NKAIN1Q4KMZ8 207 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
DENND3-202ENST00000424248 H1FNTQ75WM6 255 aaPredicted RBP12.81□□□□□ -0.36
DENND3-202ENST00000424248 ZNF683Q8IZ20 524 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 NXF5Q9H1B4 397 aaKnown RBP12.81□□□□□ -0.36
DENND3-202ENST00000424248 OR52A1Q9UKL2 312 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 OR51B4Q9Y5P0 310 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 COL24A1Q17RW2 1714 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 SHROOM3Q8TF72 1996 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 H0Y8X5 98 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 TRAPPC2LH3BP13 241 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 PRICKLE3O43900 615 aaPredicted RBP12.81□□□□□ -0.36
DENND3-202ENST00000424248 RAB1AP62820 205 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 ELFN2Q5R3F8 820 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 HIST2H3PS2Q5TEC6 136 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 AGBL4Q5VU57 503 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 APH1BQ8WW43 257 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
DENND3-202ENST00000424248 DDAH2O95865 285 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 HTR5AP47898 357 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 ZNF136P52737 540 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 ZNF628Q5EBL2 1059 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 OLIG3Q7RTU3 272 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 ZNF223Q9UK11 482 aaPredicted RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 BLVRBP30043 206 aaPredicted RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 OR10A3P58181 314 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 PMPCAQ10713 525 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 FAM53BQ14153 422 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 SPICQ8N5J4 248 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 RASD2Q96D21 266 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 FER1L6-AS2Q96M78 137 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 A4GNTQ9UNA3 340 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 OR6C76A6NM76 312 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 TRIM77I1YAP6 450 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 SLC2A10O95528 541 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 INHBBP09529 407 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 SRFP11831 508 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 C19orf57Q0VDD7 668 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 IL10RAQ13651 578 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 ZNF74Q16587 644 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 NKAIN2Q5VXU1 208 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 LGI3Q8N145 548 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 OR52H1Q8NGJ2 320 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 RBMXL1Q96E39 390 aaKnown RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 LURAP1Q96LR2 239 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 PBX4Q9BYU1 374 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 DBHP09172 617 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 OR4E1P0C645 316 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 CAPZBP47756 277 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 ZNF133P52736 654 aaPredicted RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 OR1D5P58170 312 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 RPL27P61353 136 aaKnown RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 ERVK-16P61578 105 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 MSMO1Q15800 293 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 GLYR1Q49A26 553 aaPredicted RBP12.8□□□□□ -0.36
DENND3-202ENST00000424248 PLPP7Q8NBV4 271 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 SGCZQ96LD1 299 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.8□□□□□ -0.36
DENND3-202ENST00000424248 KCND3Q9UK17 655 aa12.8□□□□□ -0.36
DENND3-202ENST00000424248 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 BCL2L11O43521 198 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 GABREP78334 506 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 TRIM61Q5EBN2 209 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 TMEM196Q5HYL7 178 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 MOB3CQ70IA8 216 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 MARCH3Q86UD3 253 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 TDHQ8IZJ6 230 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 GPR160Q9UJ42 338 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 B3GALT5Q9Y2C3 310 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 XRCC3O43542 346 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 SCO1O75880 301 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 VAMP5O95183 116 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 HIST1H1CP16403 213 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 TNFSF4P23510 183 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 SDHAP31040 664 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 SCAND1P57086 179 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 UBE2IP63279 158 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 HBG1P69891 147 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 HBG2P69892 147 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 SMAD4Q13485 552 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 KIAA0141Q14154 515 aaPredicted RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 SLC36A2Q495M3 483 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 ZNF684Q5T5D7 378 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 ZNF561Q8N587 486 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 LSMEM1Q8N8F7 131 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 PIGCQ92535 297 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 C12orf57Q99622 126 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 PLEKHA3Q9HB20 300 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 UFSP2Q9NUQ7 469 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 EXO1Q9UQ84 846 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 STRAPQ9Y3F4 350 aaKnown RBP12.79□□□□□ -0.36
DENND3-202ENST00000424248 OR6C6A6NF89 314 aa12.79□□□□□ -0.36
DENND3-202ENST00000424248 RFPL4AA6NLU0 287 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms