RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 RPA2P15927 270 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 MPGP29372 298 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 DNASE1L1P49184 302 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 EIF2B1Q14232 305 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 MARCH3Q86UD3 253 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF679Q8IYX0 411 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 OR6K3Q8NGY3 331 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 GPX8Q8TED1 209 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF75AQ96N20 296 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 TRAV14DV4A0A0A6YYC5 116 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 KANTRA0A1W2PQU2 76 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM221BA6H8Z2 402 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 MPZL1O95297 269 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 CD34P28906 385 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 YPEL5P62699 121 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 NR0B2Q15466 257 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 PRTGQ2VWP7 1150 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 ASPHD2Q6ICH7 369 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 HSD17B13Q7Z5P4 300 aaPredicted RBP13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 HRH3Q9Y5N1 445 aa13.67□□□□□ -0.22
SEMA3B-203ENST00000419007 PCP4L1A6NKN8 68 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 SEMA4FO95754 770 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 TXNDC12O95881 172 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 GUSBP08236 651 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 ICAM2P13598 275 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF117Q03924 483 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 RIPPLY1Q0D2K3 151 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 MOGAT2Q3SYC2 334 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 CHST4Q8NCG5 386 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 OR52H1Q8NGJ2 320 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM174AQ8TBP5 190 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 LDAHQ9H6V9 325 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 EMC9Q9Y3B6 208 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 MRPS18BQ9Y676 258 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 PHYHO14832 338 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 AQP8O94778 261 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 HPP00738 406 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 RIDAP52758 137 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 SCAND1P57086 179 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 DHRS2Q13268 280 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 LY6G6FQ5SQ64 297 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 TFAP2EQ6VUC0 442 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 CASTOR1Q8WTX7 329 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 OR5K4A6NMS3 321 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 ITGB2P05107 769 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 THEGLP0DJG4 465 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 CTLA4P16410 223 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 IL12BP29460 328 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 CALCRP30988 508 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 OR1D4P47884 311 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 MPPED2Q15777 294 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 CDNFQ49AH0 187 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 ATPAF1Q5TC12 328 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 OR13C3Q8NGS6 347 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 ASB5Q8WWX0 329 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 TSLPQ969D9 159 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 FAM46BQ96A09 425 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 WDR13Q9H1Z4 485 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 GLS2Q9UI32 602 aa13.66□□□□□ -0.22
SEMA3B-203ENST00000419007 PCNX3Q9H6A9 2034 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 A0A1B0GW55 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 PRSS37A4D1T9 235 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 EIF1AYO14602 144 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L2P0CJ85 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L3P0CJ86 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L4P0CJ87 422 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L5P0CJ88 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L6P0CJ89 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4L7P0CJ90 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 FNDC7Q5VTL7 733 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 C3orf33Q6P1S2 294 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 ARHGEF39Q8N4T4 335 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 LRRC46Q96FV0 321 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 VRK1Q99986 396 aaPredicted RBP13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 DUX4Q9UBX2 424 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 EPHA6Q9UF33 1036 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 KCNAB3O43448 404 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 NSA2O95478 260 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 IL33O95760 270 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 VAMP1P23763 118 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 CXADRP78310 365 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 PRAMEF17Q5VTA0 474 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 KCTD18Q6PI47 426 aaPredicted RBP13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 RHOUQ7L0Q8 258 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 ZNF584Q8IVC4 421 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 SLC25A28Q96A46 364 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 TGM7Q96PF1 710 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 ABHD6Q9BV23 337 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 MRPL22Q9NWU5 206 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 GMEB2Q9UKD1 530 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 PLCL2Q9UPR0 1127 aa13.65□□□□□ -0.22
SEMA3B-203ENST00000419007 H3BUI4 141 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms