RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 VEGFCP49767 419 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 XKP51811 444 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 LUMP51884 338 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 SMSP52788 366 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GBX2P52951 348 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 XGP55808 180 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CTAG1AP78358 180 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 S100A12P80511 92 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 MRPS6P82932 125 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 PITPNAQ00169 270 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CDK6Q00534 326 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF763Q0D2J5 394 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF177Q13360 481 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 NFATC2Q13469 925 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CDH18Q13634 790 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SCARB2Q14108 478 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 IL18Q14116 193 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GRB14Q14449 540 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 IHHQ14623 411 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FCN2Q15485 313 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TSC22D1Q15714 1073 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GRK1Q15835 563 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 AANATQ16613 207 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 Q5BKY6 102 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FBXO48Q5FWF7 155 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 C10orf120Q5SQS8 335 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 HECTD3Q5T447 861 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ARMC12Q5T9G4 340 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SLC22A10Q63ZE4 541 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF57Q68EA5 555 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF770Q6IQ21 691 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 PYHIN1Q6K0P9 492 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 REEP3Q6NUK4 255 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FUT10Q6P4F1 479 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CNIH2Q6PI25 160 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PAMR1Q6UXH9 720 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF497Q6ZNH5 498 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TMEM182Q6ZP80 229 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 ANKRD33Q7Z3H0 272 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 C16orf62Q7Z3J2 963 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GALNTL5Q7Z4T8 443 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PRSS42Q7Z5A4 293 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 COMMD7Q86VX2 200 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TPRA1Q86W33 373 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ANKRD46Q86W74 232 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SERPINA9Q86WD7 417 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 LRRC28Q86X40 367 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 APCDD1Q8J025 514 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 OR8H3Q8N146 312 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 GPC2Q8N158 579 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 C9orf62Q8N4C0 152 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 AQP11Q8NBQ7 271 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF680Q8NEM1 530 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ATP6V1C2Q8NEY4 427 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 OR5T2Q8NGG2 359 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 OR52N1Q8NH53 320 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CLHC1Q8NHS4 586 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ASB13Q8WXK3 278 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 UCN3Q969E3 161 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FBXO32Q969P5 355 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 UBE2E3Q969T4 207 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ESAMQ96AP7 390 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 UPRTQ96BW1 309 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NXPE2Q96DL1 559 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PDXPQ96GD0 296 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ERMAPQ96PL5 475 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 SLC38A2Q96QD8 506 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 LYSMD1Q96S90 227 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ZNF607Q96SK3 696 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 INTS14Q96SY0 518 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 HBEGFQ99075 208 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CITED2Q99967 270 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 NIPSNAP1Q9BPW8 284 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 PELOQ9BRX2 385 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 MCRIP2Q9BUT9 160 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 TSSK6Q9BXA6 273 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 POLR2J3Q9H1A7 115 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 MIXL1Q9H2W2 232 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NARFLQ9H6Q4 476 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 RNF167Q9H6Y7 350 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 EGLN3Q9H6Z9 239 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CWH43Q9H720 699 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ASB8Q9H765 288 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NMNAT1Q9HAN9 279 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 LMAN1LQ9HAT1 526 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NMUR1Q9HB89 426 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 TIGARQ9NQ88 270 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SPHK2Q9NRA0 654 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 INPP5EQ9NRR6 644 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 FARSBQ9NSD9 589 aaKnown RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 ACER3Q9NUN7 267 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 MED17Q9NVC6 651 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 MCUBQ9NWR8 336 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 ELOVL2Q9NXB9 296 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 DCAF16Q9NXF7 216 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 AKAP7Q9P0M2 348 aaPredicted RBP2.26□□□□□ -2.05
VPS41-206ENST00000418457 IL36AQ9UHA7 158 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 CYB5R1Q9UHQ9 305 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 SCP2D1Q9UJQ7 156 aa2.26□□□□□ -2.05
VPS41-206ENST00000418457 NDRG2Q9UN36 371 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms