RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 KHDRBS3O75525 346 aaKnown RBP13.14□□□□□ -0.31
NUP50-204ENST00000417702 ATP5HO75947 161 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ZNF250P15622 560 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 GIFP27352 417 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 RRM2P31350 389 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 RASSF2P50749 326 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ERVS71-1P61550 626 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 BNIP1Q12981 228 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
NUP50-204ENST00000417702 TRIM25Q14258 630 aaKnown RBP13.14□□□□□ -0.31
NUP50-204ENST00000417702 MTX3Q5HYI7 312 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 SMARCD3Q6STE5 483 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ZER1Q7Z7L7 766 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 SYT9Q86SS6 491 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ZDHHC21Q8IVQ6 265 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 OR1J1Q8NGS3 322 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 FANK1Q8TC84 345 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 BTBD10Q9BSF8 475 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 THTPAQ9BU02 230 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ZNF416Q9BWM5 594 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 WNT5BQ9H1J7 359 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 SYT4Q9H2B2 425 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 RERGLQ9H628 205 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 TAAR3PQ9P1P4 343 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 ACTR3BQ9P1U1 418 aa13.14□□□□□ -0.31
NUP50-204ENST00000417702 CHD3Q12873 2000 aaKnown RBP13.13□□□□□ -0.31
NUP50-204ENST00000417702 IGLV3-9A0A075B6K5 115 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 LOC100509620A0A075B734 347 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 IGHV4-61A0A0C4DH41 118 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 SOCS2O14508 198 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 SLC16A7O60669 478 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 KRT36O76013 467 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 CLPTM1O96005 669 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 MT-ND5P03915 603 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 NAT2P11245 290 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 CTLA4P16410 223 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 ZNF23P17027 643 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 FPR3P25089 353 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 SLC6A6P31641 620 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 SCRN3Q0VDG4 424 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 ZNF718Q3SXZ3 478 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 ZNF774Q6NX45 483 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 TMEM154Q6P9G4 183 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 ARL9Q6T311 187 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 CYP2R1Q6VVX0 501 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 DHFR2Q86XF0 187 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 C1orf174Q8IYL3 243 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 POP5Q969H6 163 aaKnown RBP13.13□□□□□ -0.31
NUP50-204ENST00000417702 GPA33Q99795 319 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 EMC7Q9NPA0 242 aa13.13□□□□□ -0.31
NUP50-204ENST00000417702 HINT3Q9NQE9 182 aaKnown RBP13.13□□□□□ -0.31
NUP50-204ENST00000417702 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
NUP50-204ENST00000417702 NDRG4Q9ULP0 352 aaKnown RBP13.13□□□□□ -0.31
NUP50-204ENST00000417702 YLPM1P49750 1951 aaKnown RBP13.12□□□□□ -0.31
NUP50-204ENST00000417702 TXNDC12O95881 172 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 GCH1P30793 250 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 ARHGDIAP52565 204 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 CHN2P52757 468 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 FXYD6P3P58550 94 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 RFX4Q33E94 735 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 UGT2A3Q6UWM9 527 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 HIPK1Q86Z02 1210 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 GNPDA2Q8TDQ7 276 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 RDH5Q92781 318 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 SLC7A6OSQ96CW6 309 aaPredicted RBP13.12□□□□□ -0.31
NUP50-204ENST00000417702 ASB9Q96DX5 294 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 ERMAPQ96PL5 475 aaPredicted RBP13.12□□□□□ -0.31
NUP50-204ENST00000417702 OR52D1Q9H346 318 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 ELOVL3Q9HB03 270 aa13.12□□□□□ -0.31
NUP50-204ENST00000417702 MALRD1Q5VYJ5 2156 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 LOC100289279A0A1B0GTE1 492 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 C17orf100A8MU93 164 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 IMPA2O14732 288 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 SGCEO43556 437 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 PPP1R3DO95685 299 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 HPXP02790 462 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 SCG5P05408 212 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 COX5BP10606 129 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 ZNF16P17020 682 aaPredicted RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 ATP6V1B2P21281 511 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 CRABP1P29762 137 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 WNT5AP41221 380 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 CENPAP49450 140 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 MRPS11P82912 194 aaKnown RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 TRAP1Q12931 704 aaKnown RBP13.11□□□□□ -0.31
NUP50-204ENST00000417702 RIN1Q13671 783 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 CHRFAM7AQ494W8 412 aa13.11□□□□□ -0.31
NUP50-204ENST00000417702 ELFN2Q5R3F8 820 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms