RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 STX18Q9P2W9 335 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 UVRAGQ9P2Y5 699 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LSM7Q9UK45 103 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 RNF215Q9Y6U7 377 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 NBEAQ8NFP9 2946 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 WDR87Q6ZQQ6 2873 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 IGHV4-61A0A0C4DH41 118 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 RAB19A4D1S5 217 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SAGE2PA6NJ88 616 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MIF4GDA9UHW6 222 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 G3V2L1 256 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PGRMC1O00264 195 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 AIM2O14862 343 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TAPBPO15533 448 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 EMC8O43402 210 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PRKNO60260 465 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 LSM8O95777 96 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 CLIC3O95833 236 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 IGHV4-59P01825 116 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FCER2P06734 321 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 CTSLP07711 333 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 GP9P14770 177 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 H2AFXP16104 143 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 PSMA2P25787 234 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FGF9P31371 208 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 LEPP41159 167 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 OR2B6P58173 313 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 DSCR9P59020 149 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 COL10A1Q03692 680 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 BST2Q10589 180 aaKnown RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 TIGITQ495A1 244 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C8orf74Q6P047 294 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C8orf82Q6P1X6 216 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 NT5DC3Q86UY8 548 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 SLC22A15Q8IZD6 547 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LRRC75AQ8NAA5 344 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FNDC5Q8NAU1 212 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 TMEM35BQ8NCS4 154 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PLEKHA8Q96JA3 519 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 FOXN4Q96NZ1 517 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 C9orf16Q9BUW7 83 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 LPAR2Q9HBW0 351 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 MEPEQ9NQ76 525 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 MAT2BQ9NZL9 334 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 PRG3Q9Y2Y8 225 aaPredicted RBP2.13□□□□□ -2.07
MCF2-204ENST00000414978 NAV2Q8IVL1 2488 aa2.13□□□□□ -2.07
MCF2-204ENST00000414978 DNAH14Q0VDD8 3507 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TRIOO75962 3097 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ZFYVE26Q68DK2 2539 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TRGV8A0A0C4DH27 118 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LOC100996750A0A140TA64 210 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ARHGEF33A8MVX0 844 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 FBP2O00757 339 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PSIP1O75475 530 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 JCHAINP01591 159 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CALB1P05937 261 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 APRTP07741 180 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PAEPP09466 180 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LIPCP11150 499 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CBR1P16152 277 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SDC1P18827 310 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TCN1P20061 433 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 DDOSTP39656 456 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TSFMP43897 325 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 PPIDQ08752 370 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 IL18R1Q13478 541 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PIGHQ14442 188 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 TSC22D1Q15714 1073 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SLC22A6Q4U2R8 563 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 UTF1Q5T230 341 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PWWP2BQ6NUJ5 590 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 STAC2Q6ZMT1 411 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 TMEM150AQ86TG1 271 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CCDC50Q8IVM0 306 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MMGT1Q8N4V1 131 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ZSCAN4Q8NAM6 433 aaPredicted RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 TCP10LQ8TDR4 215 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 IL22RA2Q969J5 263 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ZNF778Q96MU6 729 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 OMDQ99983 421 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LRRC1Q9BTT6 524 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 GPR174Q9BXC1 333 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 ASB8Q9H765 288 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 SMYD3Q9H7B4 428 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 NMRAL1Q9HBL8 299 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 PARVAQ9NVD7 372 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 MRPL39Q9NYK5 338 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 SENP1Q9P0U3 644 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 APOBEC3BQ9UH17 382 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 UBQLN1Q9UMX0 589 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.12□□□□□ -2.07
MCF2-204ENST00000414978 HES2Q9Y543 173 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 C5orf42Q9H799 3197 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 RBMY1BA6NDE4 496 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 RBMY1EA6NEQ0 496 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 DNAJC9-AS1A6NH13 148 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 CLOCKO15516 846 aa2.12□□□□□ -2.07
MCF2-204ENST00000414978 LCMT2O60294 686 aaKnown RBP2.12□□□□□ -2.07
MCF2-204ENST00000414978 RAMP3O60896 148 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms