RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 PCDHGA1Q9Y5H4 931 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 R4GMQ9 66 aa18.45■□□□□ 0.54
USP39-203ENST00000409470 TTC28Q96AY4 2481 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 TRAV8-7A0A075B6U6 113 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 LOC102725191A0A1B0GVB3 256 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 TMEM127O75204 238 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 H2BFMP0C1H6 154 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 EIF1AXP47813 144 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 CLDN12P56749 244 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 LRRTM1Q86UE6 522 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 LIN7BQ9HAP6 207 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 EIF1AYO14602 144 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 EEF1E1O43324 174 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 LYRM1O43325 122 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 EIF1BO60739 113 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 ADRA2CP18825 462 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 CYB561P49447 251 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 PITPNAQ00169 270 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 LRFN4Q6PJG9 635 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 ESPNLQ6ZVH7 1005 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 AKAP14Q86UN6 197 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 DNAAF1Q8NEP3 725 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 CMTM3Q96MX0 182 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 DHDHQ9UQ10 334 aa18.44■□□□□ 0.54
USP39-203ENST00000409470 PCDHGA9Q9Y5G4 932 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 MRPS18BQ9Y676 258 aaKnown RBP18.44■□□□□ 0.54
USP39-203ENST00000409470 TLX3O43711 291 aaPredicted RBP18.43■□□□□ 0.54
USP39-203ENST00000409470 TNFSF15O95150 251 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 UBL3O95164 117 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 SRD5A2P31213 254 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 KIR2DL3P43628 341 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 CLDN17P56750 224 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 RAC1P63000 192 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 CSNK2A1P68400 391 aaPredicted RBP18.43■□□□□ 0.54
USP39-203ENST00000409470 DEGS2Q6QHC5 323 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 TMPRSS12Q86WS5 348 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 MCHR2Q969V1 340 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 ZFP3Q96NJ6 502 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 NAA11Q9BSU3 229 aaPredicted RBP18.43■□□□□ 0.54
USP39-203ENST00000409470 MRI1Q9BV20 369 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 RBFOX1Q9NWB1 397 aaKnown RBP18.43■□□□□ 0.54
USP39-203ENST00000409470 POLR1DQ9Y2S0 133 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 PCSK5Q92824 1860 aa18.43■□□□□ 0.54
USP39-203ENST00000409470 IGHV3-15A0A0B4J1V0 119 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 NR4A2P43354 598 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 TPTEP56180 551 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 GPR85P60893 370 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 H3F3AP84243 136 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 BAIAP2L2Q6UXY1 529 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 ASB18Q6ZVZ8 466 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 FCRLAQ7L513 359 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 YRDCQ86U90 279 aaKnown RBP18.42■□□□□ 0.54
USP39-203ENST00000409470 CMTM4Q8IZR5 234 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 OR14L1PQ8NHC6 308 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 RNF133Q8WVZ7 376 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 PSMF1Q92530 271 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 STMN3Q9NZ72 180 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 CYB5R1Q9UHQ9 305 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 TMEM269A0A1B0GVZ9 245 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 GJE1A6NN92 205 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 TNFSF11O14788 317 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 LANCL1O43813 399 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 F10P00742 488 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 QDPRP09417 244 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 EIF2B2P49770 351 aaKnown RBP18.42■□□□□ 0.54
USP39-203ENST00000409470 AGAP6Q5VW22 663 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 SLC25A47Q6Q0C1 308 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 UBQLNLQ8IYU4 475 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 SLAMF6Q96DU3 332 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 ITPKCQ96DU7 683 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 AGAP4Q96P64 663 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 C1orf198Q9H425 327 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 EMC7Q9NPA0 242 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 OR52A1Q9UKL2 312 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 CAMK2AQ9UQM7 478 aa18.42■□□□□ 0.54
USP39-203ENST00000409470 LOC101059948A0A1B0GTJ6 334 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 FAM240BA0A1B0GVZ2 78 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 SRSF10O75494 262 aaKnown RBP18.41■□□□□ 0.54
USP39-203ENST00000409470 CALCBP10092 127 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 CDAP32320 146 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 MFAP5Q13361 173 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 TRIP6Q15654 476 aaKnown RBP18.41■□□□□ 0.54
USP39-203ENST00000409470 PLET1Q6UQ28 207 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 TRIM63Q969Q1 353 aa18.41■□□□□ 0.54
USP39-203ENST00000409470 ARPC4-TTLL3A0A0A6YYG9 625 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 A0A0J9YW62 118 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 NPIPA2E9PIF3 369 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 NPIPA3F8WFD2 350 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 RNASE12Q5GAN4 147 aaKnown RBP18.4■□□□□ 0.54
USP39-203ENST00000409470 KLHL24Q6TFL4 600 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 IZUMO1Q8IYV9 350 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 SUMF1Q8NBK3 374 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 OR2AJ1Q8NGZ0 328 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 UCN2Q96RP3 112 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 OR5V1Q9UGF6 321 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 AHCTF1Q8WYP5 2266 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 KNTC1P50748 2209 aa18.4■□□□□ 0.54
USP39-203ENST00000409470 TERTO14746 1132 aaKnown RBP18.4■□□□□ 0.54
USP39-203ENST00000409470 DOK2O60496 412 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms