RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 HIST1H1CP16403 213 aaKnown RBP22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 KIR2DS4P43632 304 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 KIR2DS1Q14954 304 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 SYT14P1Q58G82 188 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 SLC35G3Q8N808 338 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 PSD2Q9BQI7 771 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 SLC38A1Q9H2H9 487 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 BCL2L10Q9HD36 194 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 TRAV17A0A0B4J275 112 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 PMP2P02689 132 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 SBK2P0C263 348 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 PSMB1P20618 241 aaKnown RBP22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 PEA15Q15121 130 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 DPPA2Q7Z7J5 298 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 OR51E1Q8TCB6 317 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 M0R135 149 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 ZNF620Q6ZNG0 422 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 SUMF2Q8NBJ7 301 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 OR2V1Q8NHB1 315 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 FRZBQ92765 325 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 ZNF799Q96GE5 643 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 CRISPLD2Q9H0B8 497 aa22.84■■□□□ 1.25
SPIRE1-202ENST00000409402 LOC107986453A0A1B0GWG9 222 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 RAP2BP61225 183 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 OR1C1Q15619 314 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 STEAP1BQ6NZ63 245 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 CMC2Q9NRP2 79 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 PLCXD1Q9NUJ7 323 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 SSUH2Q9Y2M2 353 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 HSD17B6O14756 317 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 GLAP06280 429 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 SPI1P17947 270 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 RAB6AP20340 208 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 OR10J5Q8NHC4 309 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 HDGFL3Q9Y3E1 203 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 AKAP11Q9UKA4 1901 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 SH2D1BO14796 132 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 DSCR4P56555 118 aaPredicted RBP22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 BAXQ07812 192 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 S1PR5Q9H228 398 aa22.83■■□□□ 1.25
SPIRE1-202ENST00000409402 IGHV3-15A0A0B4J1V0 119 aa22.83■■□□□ 1.24
SPIRE1-202ENST00000409402 XRCC2O43543 280 aa22.83■■□□□ 1.24
SPIRE1-202ENST00000409402 KANSL1Q7Z3B3 1105 aa22.83■■□□□ 1.24
SPIRE1-202ENST00000409402 LAX1Q8IWV1 398 aa22.83■■□□□ 1.24
SPIRE1-202ENST00000409402 UHRF2Q96PU4 802 aa22.83■■□□□ 1.24
SPIRE1-202ENST00000409402 METAP1P53582 386 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 DYRK1AQ13627 763 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 LIPNQ5VXI9 398 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 HES7Q9BYE0 225 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 ACOXLQ9NUZ1 547 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 RPH3ALQ9UNE2 315 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 SORDQ00796 357 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 PLA2G7Q13093 441 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 CGGBP1Q9UFW8 167 aaPredicted RBP22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 PRKNO60260 465 aaPredicted RBP22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 CISD3P0C7P0 127 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 PAQR8Q8TEZ7 354 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 ZNF707Q96C28 371 aaPredicted RBP22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 SHARPINQ9H0F6 387 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 PLEKHF2Q9H8W4 249 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 CTSFQ9UBX1 484 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 TATDN3Q17R31 274 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 OR2A2Q6IF42 318 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 USP51Q70EK9 711 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 HAS2Q92819 552 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 MYO10Q9HD67 2058 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 A6NHS1 94 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 ANKRD16Q6P6B7 361 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 OR51F2Q8NH61 342 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 FAM173AQ9BQD7 235 aa22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP22.82■■□□□ 1.24
SPIRE1-202ENST00000409402 EMDP50402 254 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 EMP3P54852 163 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 FZD2Q14332 565 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 CST9LP1Q5W188 147 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 KISS1RQ969F8 398 aaPredicted RBP22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 IL9P15248 144 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 GSK3AP49840 483 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 RPS27AP62979 156 aaKnown RBP22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 UBA52P62987 128 aaKnown RBP22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 KHDC1LQ5JSQ8 128 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 LHFPL2Q6ZUX7 228 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 CISD2Q8N5K1 135 aaKnown RBP22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 OR1M1Q8NGA1 313 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 OMGP23515 440 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 TMEM81Q6P7N7 255 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 OR11G2Q8NGC1 345 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 TXNIPQ9H3M7 391 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 EXO1Q9UQ84 846 aaKnown RBP22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 NUMA1Q14980 2115 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 IGHV1OR15-9A0A0B4J2B8 117 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 ANKUB1A6NFN9 424 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 B4GALNT1Q00973 533 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 PRELID1Q9Y255 219 aa22.81■■□□□ 1.24
SPIRE1-202ENST00000409402 LINC01387J3KSC0 135 aa22.8■■□□□ 1.24
SPIRE1-202ENST00000409402 GLRA1P23415 457 aa22.8■■□□□ 1.24
SPIRE1-202ENST00000409402 PIGAP37287 484 aa22.8■■□□□ 1.24
SPIRE1-202ENST00000409402 ZNF718Q3SXZ3 478 aa22.8■■□□□ 1.24
SPIRE1-202ENST00000409402 NHSL2Q5HYW2 709 aa22.8■■□□□ 1.24
SPIRE1-202ENST00000409402 CORO6Q6QEF8 472 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms