RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 A8MXK9 166 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 HMGN4O00479 90 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF264O43296 627 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 AKR7A2O43488 359 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 KIAA0513O60268 411 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 FCGR2AP12318 317 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 UQCRC2P22695 453 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 PTBP1P26599 531 aaKnown RBP eCLIP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 G0S2P27469 103 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 LOXP28300 417 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 AGTR1P30556 359 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ALDH3A2P51648 485 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 SEC23BQ15437 767 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF141Q15928 474 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 SYPL1Q16563 259 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 CDNFQ49AH0 187 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 COX20Q5RI15 118 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 SLC25A24Q6NUK1 477 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 STAC2Q6ZMT1 411 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NUFIP2Q7Z417 695 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 KRTAP1-3Q8IUG1 177 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 C8orf59Q8N0T1 100 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 C9orf62Q8N4C0 152 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 LRRC17Q8N6Y2 441 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 YIPF7Q8N8F6 280 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 BHLHE22Q8NFJ8 381 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 OR5W2Q8NH69 310 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NDNFQ8TB73 568 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 RNF128Q8TEB7 428 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ROPN1LQ96C74 230 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NEURL3Q96EH8 262 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 PIK3IP1Q96FE7 263 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 GMPPAQ96IJ6 420 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 LINC00052Q96N35 136 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 CCDC115Q96NT0 180 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 FYTTD1Q96QD9 318 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 KCNJ15Q99712 375 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 THUMPD3Q9BV44 507 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NXF2Q9GZY0 626 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NUAK2Q9H093 628 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 MIXL1Q9H2W2 232 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 GRHPRQ9UBQ7 328 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 WARS2Q9UGM6 360 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 ING1Q9UK53 422 aaPredicted RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 MCTS1Q9ULC4 181 aaKnown RBP8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 NAV3Q8IVL0 2385 aa8.58□□□□□ -1.04
NIF3L1-202ENST00000409020 TEX13CA0A0J9YWL9 993 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 CCDC154A6NI56 674 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 A8MV72 311 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 G3V2T6 193 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 C16orf97H3BN30 126 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 ETV2O00321 342 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 ITGB1BP1O14713 200 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 SYNGR4O95473 234 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 CHRM4P08173 479 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 LINC00614P0C842 121 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 DNASE1P24855 282 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 ELK4P28324 431 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 S100A3P33764 101 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 GSK3AP49840 483 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 AQP5P55064 265 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 MAB21L1Q13394 359 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 KEAP1Q14145 624 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 OCLNQ16625 522 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF404Q494X3 552 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 DNLZQ5SXM8 178 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 RPL13AP3Q6NVV1 102 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 DLEU7Q6UYE1 221 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 TUSC5Q8IXB3 177 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 FAM71CQ8NEG0 241 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 WFDC11Q8NEX6 87 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 OR9I1Q8NGQ6 314 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 OR6K3Q8NGY3 331 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF775Q96BV0 537 aaPredicted RBP8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 SORCS2Q96PQ0 1159 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 REG4Q9BYZ8 158 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 OR51B6Q9H340 312 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 PLSCR4Q9NRQ2 329 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 EMC9Q9Y3B6 208 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 PEX16Q9Y5Y5 336 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 HEATR5AQ86XA9 2040 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 TLN2Q9Y4G6 2542 aa8.57□□□□□ -1.04
NIF3L1-202ENST00000409020 DUXAA6NLW8 204 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CASKO14936 926 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 EIF4E2O60573 245 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SNAPC5O75971 98 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CSTAP01040 98 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RLN2P04090 185 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 HCKP08631 526 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CRYGSP22914 178 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CHI3L1P36222 383 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SUMO3P55854 103 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CTBP2P56545 445 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ADAM8P78325 824 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CBFBQ13951 182 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 FGFBP1Q14512 234 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 HFEQ30201 348 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms