RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PTP4A3O75365 173 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 IGHV3-13P01766 116 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 RHCEP18577 417 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 MSR1P21757 451 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 MPV17P39210 176 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 GUCA1AP43080 201 aaPredicted RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 GYS2P54840 703 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 MRPS11P82912 194 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 RFPL4BQ6ZWI9 263 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 CPLX4Q7Z7G2 160 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 PHC2Q8IXK0 858 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 CLDND2Q8NHS1 167 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 SNX33Q8WV41 574 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 RASD2Q96D21 266 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 MARS2Q96GW9 593 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 C1orf159Q96HA4 380 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 ZNF570Q96NI8 536 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 RACGAP1Q9H0H5 632 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 POLE4Q9NR33 117 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 EIF3KQ9UBQ5 218 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 IL20RAQ9UHF4 553 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 SIGLEC7Q9Y286 467 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 TMEM5Q9Y2B1 443 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 IMPA2O14732 288 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 PPIHO43447 177 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 NGFP01138 241 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 MSX2P35548 267 aaPredicted RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 OMPP47874 163 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 TMEM33P57088 247 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 PCBD1P61457 104 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 OTPQ5XKR4 325 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 THSD4Q6ZMP0 1018 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 ALDH16A1Q8IZ83 802 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 OR52J3Q8NH60 311 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 SLC25A40Q8TBP6 338 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 IPCEF1Q8WWN9 437 aaPredicted RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 OR2J1Q9GZK6 312 aa16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 SAMD4AQ9UPU9 718 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-204ENST00000407422 TEX13CA0A0J9YWL9 993 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 PRSS37A4D1T9 235 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 XKRYO14609 159 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 CTLA4P16410 223 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 HNF1AP20823 631 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 FXYD6P3P58550 94 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 PCGF3Q3KNV8 242 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 ZNF718Q3SXZ3 478 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 ABHD4Q8TB40 342 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 KLF14Q8TD94 323 aaPredicted RBP16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 GPA33Q99795 319 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 NSRP1Q9H0G5 558 aaKnown RBP16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 GORASP2Q9H8Y8 452 aa16.44■□□□□ 0.22
SMARCB1-204ENST00000407422 C12orf71A8MTZ7 269 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 NDUFB2O95178 105 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 SRSF2Q01130 221 aaKnown RBP16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 TSTQ16762 297 aaKnown RBP16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 TMEM158Q8WZ71 300 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 RSRC1Q96IZ7 334 aaKnown RBP16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 DHRS1Q96LJ7 313 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 FUZQ9BT04 418 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 NRIP3Q9NQ35 241 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 NKIRAS2Q9NYR9 191 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 TREM2Q9NZC2 230 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 CACNG2Q9Y698 323 aa16.43■□□□□ 0.22
SMARCB1-204ENST00000407422 FAM157AC9JC47 383 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 ICMTO60725 284 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 GMNNO75496 209 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 GCH1P30793 250 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 ZNF81P51508 661 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 MMP15P51511 669 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 PPP1CBP62140 327 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 KRR1Q13601 381 aaKnown RBP16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 MOGQ16653 247 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 SYT9Q86SS6 491 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 C4orf45Q96LM5 186 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 SYT4Q9H2B2 425 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 RERGLQ9H628 205 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 TMEFF2Q9UIK5 374 aaPredicted RBP16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 FBN3Q75N90 2809 aa16.42■□□□□ 0.22
SMARCB1-204ENST00000407422 SOCS2O14508 198 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 TPD52L2O43399 206 aaKnown RBP16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 SPRY3O43610 288 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 AHCYL1O43865 530 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 MPZL1O95297 269 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 SEMG1P04279 462 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 SDHAP31040 664 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 CRYBB2P43320 205 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 AVPI1Q5T686 147 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 MBNL2Q5VZF2 373 aaKnown RBP16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 PTCHD4Q6ZW05 846 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 USP51Q70EK9 711 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 PYURFQ96I23 114 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 GPX7Q96SL4 187 aaPredicted RBP16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 NDEL1Q9GZM8 345 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 LPAR2Q9HBW0 351 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 DECR2Q9NUI1 292 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 ARL8BQ9NVJ2 186 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 CD300AQ9UGN4 299 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 AURKCQ9UQB9 309 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 IER3IP1Q9Y5U9 82 aa16.41■□□□□ 0.22
SMARCB1-204ENST00000407422 IGHV1-69-2A0A0G2JMI3 117 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms