RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RPS25P62851 125 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 SIRPAP78324 504 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 AQP6Q13520 282 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 INSL4Q14641 139 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SPCS2Q15005 226 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CEACAM16Q2WEN9 425 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 LINC00303Q3SY05 128 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 CDONQ4KMG0 1287 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PRR30Q53SZ7 412 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 TSPO2Q5TGU0 170 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 LIPNQ5VXI9 398 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 C19orf48Q6RUI8 117 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 NUFIP2Q7Z417 695 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 OR2AJ1Q8NGZ0 328 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 HSD17B8Q92506 261 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 TMEM54Q969K7 222 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 APH1AQ96BI3 265 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 INTS12Q96CB8 462 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 PDCD1LG2Q9BQ51 273 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 ZNF416Q9BWM5 594 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 PRDM14Q9GZV8 571 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 SLCO5A1Q9H2Y9 848 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 BRD7Q9NPI1 651 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 B3GAT2Q9NPZ5 323 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 NDUFB11Q9NX14 153 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 UPB1Q9UBR1 384 aa3.28□□□□□ -1.88
RTN4-208ENST00000404909 MRM2Q9UI43 246 aaKnown RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 FOXD3Q9UJU5 478 aaPredicted RBP3.28□□□□□ -1.88
RTN4-208ENST00000404909 INTS1Q8N201 2190 aaKnown RBP3.28□□□□□ -1.89
RTN4-208ENST00000404909 IGKV3D-15A0A087WSY6 115 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TRBV2A0A0J9YWF9 115 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 A0A1B0GVC2 190 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 METTL15A6NJ78 407 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CD8B2A6NJW9 211 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RER1O15258 196 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GPX5O75715 221 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GABARAPO95166 117 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 HRGP04196 525 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CD8BP10966 210 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 FCGR2AP12318 317 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ABOP16442 354 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 MSR1P21757 451 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ROR2Q01974 943 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 FAPQ12884 760 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TPBGQ13641 420 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TAF13Q15543 124 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TIMM50Q3ZCQ8 353 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 C22orf42Q6IC83 251 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 KCTD18Q6PI47 426 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 LINGO2Q7L985 606 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 SYS1Q8N2H4 156 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 Q8NA96 180 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GHSRQ92847 366 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GPR137Q96N19 417 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 MYCBPQ99417 103 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 SH3GL3Q99963 347 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 POLE4Q9NR33 117 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SLC7A10Q9NS82 523 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CYB5R1Q9UHQ9 305 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SH3BGRL2Q9UJC5 107 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SSR3Q9UNL2 185 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 KIAA1549Q9HCM3 1950 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 USP24Q9UPU5 2620 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 A0A096LPE4 126 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 A0A1W2PPK0 400 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 A0A1W2PPZ6 126 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TTLL8A6PVC2 850 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF724A8MTY0 619 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF587BE7ETH6 402 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF701M0R085 212 aaPredicted RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 PHYHO14832 338 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 DOK2O60496 412 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 PATE4P0C8F1 98 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 GABRA5P31644 462 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CAPZA2P47755 286 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TAS2R43P59537 309 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 NANOS3P60323 173 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 GALK2Q01415 458 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 EGR3Q06889 387 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 NFATC3Q12968 1075 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 C10orf128Q5T292 105 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RPUSD3Q6P087 351 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 CFAP77Q6ZQR2 320 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 CD163Q86VB7 1156 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF679Q8IYX0 411 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ZNF454Q8N9F8 522 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 OR13C5Q8NGS8 318 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 OR52N5Q8NH56 324 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 ASB17Q8WXJ9 295 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 SNRNP40Q96DI7 357 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 TRMT61AQ96FX7 289 aaKnown RBP3.27□□□□□ -1.89
RTN4-208ENST00000404909 MAP6Q96JE9 813 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 OR8B4Q96RC9 309 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 MNTQ99583 582 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 DOK1Q99704 481 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 NELFAQ9H3P2 528 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 TPK1Q9H3S4 243 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 C1orf198Q9H425 327 aa3.27□□□□□ -1.89
RTN4-208ENST00000404909 RNF122Q9H9V4 155 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms