RNA–Protein interactions for RNA: ENST00000404744.1

CDPF1-204, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3 BASIC

Gene CDPF1, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-204ENST00000404744 AMDHD2Q9Y303 409 aa13.79□□□□□ -0.2
CDPF1-204ENST00000404744 SELENOFO60613 162 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 SBK2P0C263 348 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 PPP3CBP16298 524 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 CXCR4P61073 352 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 AQP6Q13520 282 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 GGTLC2Q14390 218 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 TMEM53Q6P2H8 277 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 SYT9Q86SS6 491 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 TIGD4Q8IY51 512 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 ZNF786Q8N393 782 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 HSD17B8Q92506 261 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 BOD1Q96IK1 185 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 ASH2LQ9UBL3 628 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 TPRKBQ9Y3C4 175 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 PCDHGB1Q9Y5G3 927 aa13.78□□□□□ -0.2
CDPF1-204ENST00000404744 SETXQ7Z333 2677 aaKnown RBP13.78□□□□□ -0.2
CDPF1-204ENST00000404744 ARPC4-TTLL3A0A0A6YYG9 625 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 A0A1W2PR80 420 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 WIPF3A6NGB9 483 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 RAB36O95755 333 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 FADS2O95864 444 aaKnown RBP13.77□□□□□ -0.21
CDPF1-204ENST00000404744 HLA-HP01893 362 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 PAX7P23759 505 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 ARR3P36575 388 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 SORDQ00796 357 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 PIGFQ07326 219 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 SCRN3Q0VDG4 424 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 RAB40BQ12829 278 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 ENDOGQ14249 297 aaKnown RBP13.77□□□□□ -0.21
CDPF1-204ENST00000404744 GSG1Q2KHT4 349 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 TEX30Q5JUR7 227 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 C1QTNF12Q5T7M4 302 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 ALKBH2Q6NS38 261 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 SSX8Q7RTT4 187 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 DPY19L4Q7Z388 723 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 LINC00346Q8IVM7 164 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 ZNF540Q8NDQ6 660 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 GJC3Q8NFK1 279 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 MNTQ99583 582 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 MED18Q9BUE0 208 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 YIPF3Q9GZM5 350 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 PLCXD1Q9NUJ7 323 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 LAMP5Q9UJQ1 280 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 BLOC1S6Q9UL45 172 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 TIMM10BQ9Y5J6 103 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 TMEM14AQ9Y6G1 99 aa13.77□□□□□ -0.21
CDPF1-204ENST00000404744 EFCAB10A6NFE3 127 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 XPNPEP2O43895 674 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 APOL3O95236 402 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 PEX19P40855 299 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 RAB1AP62820 205 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 TUBA1BP68363 451 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 TUBA4AP68366 448 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 PLP2Q04941 152 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 EIF2B1Q14232 305 aaKnown RBP13.76□□□□□ -0.21
CDPF1-204ENST00000404744 PPA1Q15181 289 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 RBM48Q5RL73 367 aaKnown RBP13.76□□□□□ -0.21
CDPF1-204ENST00000404744 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 SLC35F2Q8IXU6 374 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 ALDH16A1Q8IZ83 802 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 ZNF454Q8N9F8 522 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 OR4F15Q8NGB8 312 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 THEM6Q8WUY1 208 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 FBXO17Q96EF6 278 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 ADGRL4Q9HBW9 690 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 MOV10Q9HCE1 1003 aaKnown RBP13.76□□□□□ -0.21
CDPF1-204ENST00000404744 UBAP1Q9NZ09 502 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 CYB5R1Q9UHQ9 305 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 LRCH1Q9Y2L9 728 aa13.76□□□□□ -0.21
CDPF1-204ENST00000404744 ZNF670-ZNF695F2Z2N8 137 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 SLC1A7O00341 560 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 PHYHO14832 338 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 CCDC159P0C7I6 412 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 OR2T7P0C7T2 308 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 ZNF32P17041 273 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 RPS27P42677 84 aaKnown RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 ACTC1P68032 377 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 ACTA1P68133 377 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 TFF3Q07654 80 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 LAIR2Q6ISS4 152 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 SLC18B1Q6NT16 456 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 CORO6Q6QEF8 472 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 STX19Q8N4C7 294 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 WDR31Q8NA23 367 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 OR10H4Q8NGA5 316 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 OR2T27Q8NH04 317 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 GGHQ92820 318 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 LGALS12Q96DT0 336 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 MYCBPQ99417 103 aaPredicted RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 C1orf198Q9H425 327 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 MRPS18AQ9NVS2 196 aaKnown RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 CNOT2Q9NZN8 540 aaKnown RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 GDF2Q9UK05 429 aaPredicted RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
CDPF1-204ENST00000404744 LHFPL6Q9Y693 200 aa13.75□□□□□ -0.21
CDPF1-204ENST00000404744 IQCMA0A1B0GVH7 501 aa13.74□□□□□ -0.21
CDPF1-204ENST00000404744 TUBAL3A6NHL2 446 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms