RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ATP6V1E1P36543 226 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ARR3P36575 388 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 PEX19P40855 299 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SLC15A1P46059 708 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 UBE2NP61088 152 aaKnown RBP10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ADAM8P78325 824 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SORDQ00796 357 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF91Q05481 1191 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 RAB40BQ12829 278 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 AQP6Q13520 282 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 HIKESHIQ53FT3 197 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 RBM48Q5RL73 367 aaKnown RBP10.77□□□□□ -0.69
LINC00339-201ENST00000404210 LYPD4Q6UWN0 246 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ERI1Q8IV48 349 aaKnown RBP10.77□□□□□ -0.69
LINC00339-201ENST00000404210 GJC3Q8NFK1 279 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 BPIFB6Q8NFQ5 453 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 OR51G2Q8NGK0 314 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 NANOS1Q8WY41 292 aaKnown RBP10.77□□□□□ -0.69
LINC00339-201ENST00000404210 GGHQ92820 318 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 S100PBPQ96BU1 408 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 RNFT2Q96EX2 444 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 MNTQ99583 582 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ACTR6Q9GZN1 396 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ADGRL4Q9HBW9 690 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 EMC7Q9NPA0 242 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SCN3BQ9NY72 215 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 B3GNT2Q9NY97 397 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF224Q9NZL3 707 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 TIMM10BQ9Y5J6 103 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 COMMD3-BMI1R4GMX3 469 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 CFAP46Q8IYW2 2715 aa10.77□□□□□ -0.69
LINC00339-201ENST00000404210 SLC1A7O00341 560 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 UBL3O95164 117 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 MMP7P09237 267 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 OR2T7P0C7T2 308 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CBR1P16152 277 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 NUDT6P53370 316 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 RAB1AP62820 205 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 HIST1H3AP68431 136 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 HIST2H3PS2Q5TEC6 136 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 TMEM53Q6P2H8 277 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 HIST2H3AQ71DI3 136 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 DPY19L4Q7Z388 723 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CDC20BQ86Y33 519 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF454Q8N9F8 522 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 OR6N2Q8NGY6 317 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 OR2AJ1Q8NGZ0 328 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 OR2T27Q8NH04 317 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 OTOSQ8NHW6 89 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 HTRA1Q92743 480 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 MUCL1Q96DR8 90 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 LGALS12Q96DT0 336 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CNN2Q99439 309 aaKnown RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 RNF121Q9H920 327 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 MOV10Q9HCE1 1003 aaKnown RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 FGF20Q9NP95 211 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CCNB1IP1Q9NPC3 277 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CNOT2Q9NZN8 540 aaKnown RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 NDRG3Q9UGV2 375 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 TPRKBQ9Y3C4 175 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 PCDHGB5Q9Y5G0 923 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
LINC00339-201ENST00000404210 SLC25A15Q9Y619 301 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 LHFPL6Q9Y693 200 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 TMEM14AQ9Y6G1 99 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 CHD6Q8TD26 2715 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
LINC00339-201ENST00000404210 EFCAB10A6NFE3 127 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 J3QRE1 110 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 PHYHO14832 338 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 XPNPEP2O43895 674 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 SELENOFO60613 162 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 FAM20BO75063 409 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 FADS2O95864 444 aaKnown RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 MRPL3P09001 348 aaKnown RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 CD79AP11912 226 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF32P17041 273 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ALOX5APP20292 161 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 DCKP27707 260 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 CCKARP32238 428 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 NAA10P41227 235 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 CAPZA2P47755 286 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 SCRN3Q0VDG4 424 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 OTPQ5XKR4 325 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 SLC18B1Q6NT16 456 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 RHOUQ7L0Q8 258 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 SLC35F2Q8IXU6 374 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 FAM169BQ8N8A8 192 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF540Q8NDQ6 660 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 OR4F15Q8NGB8 312 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 FGFBP3Q8TAT2 258 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 IPCEF1Q8WWN9 437 aaPredicted RBP10.75□□□□□ -0.69
LINC00339-201ENST00000404210 ZNF75AQ96N20 296 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 WFIKKN1Q96NZ8 548 aa10.75□□□□□ -0.69
LINC00339-201ENST00000404210 C1orf198Q9H425 327 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms