RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 SIRPAP78324 504 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 MRPS34P82930 218 aaKnown RBP17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 EGR3Q06889 387 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 ENDOGQ14249 297 aaKnown RBP17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 C1orf185Q5T7R7 199 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 LIPKQ5VXJ0 399 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 PLEKHG7Q6ZR37 379 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 FAM214BQ7L5A3 538 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 DCXRQ7Z4W1 244 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 ZNF100Q8IYN0 542 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 OR52N5Q8NH56 324 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 MBD3L2Q8NHZ7 208 aaPredicted RBP17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 RNF166Q96A37 237 aaPredicted RBP17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 ISOC1Q96CN7 298 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 OR8B4Q96RC9 309 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 ZNF416Q9BWM5 594 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 TMEM38BQ9NVV0 291 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 SLCO1C1Q9NYB5 712 aa17.11■□□□□ 0.33
AC008060.1-201ENST00000401499 PNMA8CA0A1B0GUJ8 204 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 CCDC160A6NGH7 325 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 FIGNL2A6NMB9 653 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 RPL36A-HNRNPH2H7BZ11 118 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 CCRL2O00421 344 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 TOXO94900 526 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 NR4A1P22736 598 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 OR3A2P47893 321 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 BDH1Q02338 343 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 FOXF2Q12947 444 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 TPBGQ13641 420 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 GFRALQ6UXV0 394 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 ANKRD13BQ86YJ7 626 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 PHC2Q8IXK0 858 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 ASB17Q8WXJ9 295 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 MAP6Q96JE9 813 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 FOXB1Q99853 325 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 TTYH2Q9BSA4 534 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 TRIM36Q9NQ86 728 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 ASH2LQ9UBL3 628 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 ENPP5Q9UJA9 477 aa17.1■□□□□ 0.33
AC008060.1-201ENST00000401499 METTL15A6NJ78 407 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 ERVH48-1M5A8F1 160 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 KRT33AO76009 404 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 SFTPCP11686 197 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 PTGER4P35408 488 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 KIR2DL2P43627 348 aaPredicted RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 LSM6P62312 80 aaKnown RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 ROM1Q03395 351 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 SF3B4Q15427 424 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 OR2A2Q6IF42 318 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 LRRN1Q6UXK5 716 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 C3P1Q6ZMU1 363 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 CFAP77Q6ZQR2 320 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 SPATC1Q76KD6 591 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 P2RY8Q86VZ1 359 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 OR10S1Q8NGN2 331 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 DGCR14Q96DF8 476 aaKnown RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 MRPL48Q96GC5 212 aaKnown RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 TM9SF2Q99805 663 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 CDADC1Q9BWV3 514 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 NDUFB11Q9NX14 153 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 RSL24D1Q9UHA3 163 aaKnown RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 ST6GALNAC2Q9UJ37 374 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 GDF2Q9UK05 429 aaPredicted RBP17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 IKZF2Q9UKS7 526 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 ZNF835Q9Y2P0 537 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 POLR1DQ9Y2S0 133 aa17.09■□□□□ 0.33
AC008060.1-201ENST00000401499 SULT1C4O75897 302 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 KRT8P05787 483 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 B4GALT1P15291 398 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 GADD45AP24522 165 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 PSMB10P40306 273 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 STK11Q15831 433 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 VWA1Q6PCB0 445 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 TFAP2EQ6VUC0 442 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 LRRC18Q8N456 261 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 ZNF420Q8TAQ5 688 aaPredicted RBP17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 UFD1Q92890 307 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 RPL3LQ92901 407 aaKnown RBP17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 DOK1Q99704 481 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 MALT1Q9UDY8 824 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 SF3B6Q9Y3B4 125 aaKnown RBP17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 EMC9Q9Y3B6 208 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 INTS1Q8N201 2190 aaKnown RBP17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 SHANK1Q9Y566 2161 aa17.08■□□□□ 0.32
AC008060.1-201ENST00000401499 TTLL8A6PVC2 850 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 ZNF587BE7ETH6 402 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 TMCC2O75069 709 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 GABARAPO95166 117 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 CELP19835 753 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 NPR2P20594 1047 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 GUCA1AP43080 201 aaPredicted RBP17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 CAPZA2P47755 286 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 TMBIM6P55061 237 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 FAPQ12884 760 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 CTF1Q16619 201 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 FAM27BQ5VT28 67 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 C9orf135Q5VTT2 229 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 LIPNQ5VXI9 398 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 DOLPP1Q86YN1 238 aa17.07■□□□□ 0.32
AC008060.1-201ENST00000401499 ZNF679Q8IYX0 411 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms