RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 SHANK1Q9Y566 2161 aa4.7□□□□□ -1.66
HMGB3P7-201ENST00000400214 HIVEP3Q5T1R4 2406 aa4.7□□□□□ -1.66
HMGB3P7-201ENST00000400214 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 A0A0J9YVX5 310 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRP5LA4QPB2 252 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 VSTM2BA6NLU5 285 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SRRM4A7MD48 611 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C9J4A7 227 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 H3BQF6 201 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 RHODO00212 210 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 FBP2O00757 339 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 DVL1O14640 695 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 HAT1O14929 419 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 ARPC2O15144 300 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 TAPBPO15533 448 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 GPR137BO60478 399 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SHOX2O60902 331 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CNOT3O75175 753 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C2P06681 752 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 ARSBP15848 533 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CNR1P21554 472 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 GPX3P22352 226 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 GCAP28676 217 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SFTPDP35247 375 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 HPCAL1P37235 193 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 ID1P41134 155 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SERPINB8P50452 374 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CCR8P51685 355 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 VSX2P58304 361 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PRPS1P60891 318 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 ERVK-25P63136 954 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 EEF1A1P68104 462 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PHEXP78562 749 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LCN2P80188 198 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SRYQ05066 204 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 FOXL1Q12952 345 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR4D1Q15615 310 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR1C1Q15619 314 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 FAM153CQ494X1 144 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 GLYR1Q49A26 553 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 EEF1A1P5Q5VTE0 462 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 DPY19L2P2Q6ZN68 376 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRRC74BQ6ZQY2 392 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C17orf107Q6ZR85 190 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 Q6ZRM9 215 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 TTLL10Q6ZVT0 673 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 Q75L30 129 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 COX15Q7KZN9 410 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 P4HA3Q7Z4N8 544 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 VN1R4Q7Z5H5 301 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CMC1Q7Z7K0 106 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 THOC6Q86W42 341 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 GSPT2Q8IYD1 628 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 KLHDC1Q8N7A1 406 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRTM2Q8N967 370 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 TTC29Q8NA56 475 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRRC75AQ8NAA5 344 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 FAM98AQ8NCA5 519 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CCDC197Q8NCU1 140 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR2Y1Q8NGV0 311 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 ZNF473Q8WTR7 871 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 CCDC107Q8WV48 283 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 NEIL2Q969S2 332 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 RERGQ96A58 199 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PPP1R14BQ96C90 147 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 BPIFA2Q96DR5 249 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 WDR34Q96EX3 536 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 MED8Q96G25 268 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PPP1R36Q96LQ0 422 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C10orf90Q96M02 699 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PRAP1Q96NZ9 151 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 IP6K3Q96PC2 410 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 BBC3Q96PG8 261 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 C7orf50Q9BRJ6 194 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LRMDAQ9H2I8 198 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SAV1Q9H4B6 383 aaPredicted RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 NT5DC2Q9H857 520 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 RNF121Q9H920 327 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 MOV10Q9HCE1 1003 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PNRC2Q9NPJ4 139 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 PLEK2Q9NYT0 353 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 DHCR7Q9UBM7 475 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 MRM2Q9UI43 246 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 UTS2RQ9UKP6 389 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 LAMP3Q9UQV4 416 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 MRPS18BQ9Y676 258 aaKnown RBP4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 SLC22A7Q9Y694 548 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 EML6Q6ZMW3 1958 aa4.69□□□□□ -1.66
HMGB3P7-201ENST00000400214 UBR5O95071 2799 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 EXOC1LA0A1B0GW35 172 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 A0A1W2PQ72 361 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 FABP12A6NFH5 140 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 CCT8L1PA6NM43 557 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 SYCE1LA8MT33 242 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 TMEM178BH3BS89 294 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 OVOL3O00110 214 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 RNASET2O00584 256 aaKnown RBP4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 NDUFAB1O14561 156 aa4.68□□□□□ -1.66
HMGB3P7-201ENST00000400214 OR7A17O14581 309 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms