RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 SNAP29O95721 258 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PTHP01270 115 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FOSL1P15407 271 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 APLNRP35414 380 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GLRXP35754 106 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NUDT6P53370 316 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ERVS71-1P61550 626 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MEP1BQ16820 701 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZNF774Q6NX45 483 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RASSF6Q6ZTQ3 369 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 JAZF1Q86VZ6 243 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GLB1L2Q8IW92 636 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 HS3ST5Q8IZT8 346 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR6V1Q8N148 313 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MAPK1IP1LQ8NDC0 245 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SDR9C7Q8NEX9 313 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR10G2Q8NGC3 310 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FEVQ99581 238 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DOK1Q99704 481 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 BDH2Q9BUT1 245 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DGCR6LQ9BY27 220 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 C1orf198Q9H425 327 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FN3KQ9H479 309 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 BARX1Q9HBU1 254 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RPRD1BQ9NQG5 326 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
HLA-DQB1-202ENST00000399079 C5orf49A4QMS7 147 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR6C68A6NDL8 312 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FKBP6O75344 327 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CENPAP49450 140 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PCBD1P61457 104 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CBX1P83916 185 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZNF101Q8IZC7 436 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ICA1LQ8NDH6 482 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR52L1Q8NGH7 329 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GIPC3Q8TF64 312 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MRPL24Q96A35 216 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 POM121L2Q96KW2 1035 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TSSK6Q9BXA6 273 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TBC1D23Q9NUY8 699 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 MYEF2Q9P2K5 600 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 B9D1Q9UPM9 204 aa12.12□□□□□ -0.47
HLA-DQB1-202ENST00000399079 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 C12orf71A8MTZ7 269 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 IDH3BO43837 385 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RENP00797 406 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LCKP06239 509 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PRKACGP22612 351 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CRABP1P29762 137 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 WNT5AP41221 380 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 EFNA4P52798 201 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 UCP2P55851 309 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ZNF362Q5T0B9 420 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RPL13AP3Q6NVV1 102 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ALDH16A1Q8IZ83 802 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CYB561A3Q8NBI2 242 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PAPD5Q8NDF8 572 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 NPEPL1Q8NDH3 523 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR1J2Q8NGS2 313 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 C11orf40Q8WZ69 217 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PDP1Q9P0J1 537 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ASH2LQ9UBL3 628 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DUSP13Q9UII6 198 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SETD2Q9BYW2 2564 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 IGHV4-30-2A0A087WSY4 118 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 E2F6O75461 281 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TIPRLO75663 272 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CLPTM1O96005 669 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 F12P00748 615 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ADRA2AP08913 450 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GSTM3P21266 225 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GDI2P50395 445 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RPS23P62266 143 aaKnown RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RGS7BPQ6MZT1 257 aaPredicted RBP12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 OR4Q3Q8NH05 313 aa12.11□□□□□ -0.47
HLA-DQB1-202ENST00000399079 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RER1O15258 196 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 SGCEO43556 437 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 DOK2O60496 412 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 TFP02787 698 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 GAAP10253 952 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 PCSK6P29122 969 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 RAD52P43351 418 aa12.1□□□□□ -0.47
HLA-DQB1-202ENST00000399079 ALDH3B1P43353 468 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms