RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 OIP5O43482 229 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 HLA-AP01891 365 aaKnown RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 DAOP14920 347 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CSF2RAP15509 400 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 MUC1P15941 1255 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CSRP1P21291 193 aaKnown RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 SDHAP31040 664 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PBX2P40425 430 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 F2RL1P55085 397 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CASP6P55212 293 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ACTR1AP61163 376 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ARF3P61204 181 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 TSC22D1Q15714 1073 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ELAVL1Q15717 326 aaKnown RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ISXQ2M1V0 245 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ALG10Q5BKT4 473 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 OTPQ5XKR4 325 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 OR52W1Q6IF63 320 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ARMC10Q8N2F6 343 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PLPP7Q8NBV4 271 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 MRPL38Q96DV4 380 aaKnown RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 C20orf24Q9BUV8 137 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 LAT2Q9GZY6 243 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 HRH4Q9H3N8 390 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 SFXN1Q9H9B4 322 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ZMAT3Q9HA38 289 aaKnown RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 SDHAF3Q9NRP4 125 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 hCG_1809904A0A1W2PP81 198 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 A0A1W2PQU0 124 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 A0A1W2PR64 198 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 A0A1W2PRV1 198 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 COLCA2A8K830 154 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CYR61O00622 381 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CYB5AP00167 134 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CD8AP01732 235 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 FBP1P09467 338 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PVRP15151 417 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ZNF28P17035 718 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CPT2P23786 658 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CCR4P51679 360 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 SLC25A1P53007 311 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 RASGEF1BQ0VAM2 473 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ZNF345Q14585 488 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ATPAF1Q5TC12 328 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-206ENST00000397163 UQCC3Q6UW78 93 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 LRRC69Q6ZNQ3 347 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ACOT7LQ6ZUV0 252 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CDC20BQ86Y33 519 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 BPIFB2Q8N4F0 458 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 GATSQ8NAP1 163 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 OR4A4PQ8NGN8 299 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 OR14C36Q8NHC7 312 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 EDAQ92838 391 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 APOOQ9BUR5 198 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 GAREM1Q9H706 876 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 WDR76Q9H967 626 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PILRAQ9UKJ1 303 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 PCDHGA1Q9Y5H4 931 aa8.29□□□□□ -1.08
CAPN3-206ENST00000397163 CEP290O15078 2479 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ALPK2Q86TB3 2170 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 CXorf65A6NEN9 183 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 A6NLC8 198 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 WRBO00258 174 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ALOX12BO75342 701 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 GPANK1O95872 356 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 NME1P15531 152 aaKnown RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 IGFALSP35858 605 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 PRKXP51817 358 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ATP1B3P54709 279 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 CCINQ13939 588 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 NR0B2Q15466 257 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 NKPD1Q17RQ9 610 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 GFOD2Q3B7J2 385 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 FCRL6Q6DN72 434 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 PRSS35Q8N3Z0 413 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ZNF565Q8N9K5 539 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 TMEM229BQ8NBD8 167 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 INO80EQ8NBZ0 244 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 CTHRC1Q96CG8 243 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SEH1LQ96EE3 360 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 PHYHIPLQ96FC7 376 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 DCBLD2Q96PD2 775 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 OR2M4Q96R27 311 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ZFYVE21Q9BQ24 234 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 LRIT1Q9P2V4 623 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 GRHPRQ9UBQ7 328 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 PRR19A6NJB7 356 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 ZNF736B4DX44 427 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SLC17A2O00624 439 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 UBE2CO00762 179 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 HLA-DQA2P01906 255 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 CD96P40200 585 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 SSTP61278 116 aa8.28□□□□□ -1.08
CAPN3-206ENST00000397163 RPS4XP62701 263 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms