RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 EIF2B1Q14232 305 aaKnown RBP16.94■□□□□ 0.3
CBX1-202ENST00000393408 EBPQ15125 230 aaKnown RBP16.94■□□□□ 0.3
CBX1-202ENST00000393408 GLYATL3Q5SZD4 288 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 C9orf40Q8IXQ3 194 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 OR6M1Q8NGM8 313 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 DMRTA2Q96SC8 542 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 POTEKPQ9BYX7 375 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 CUTCQ9NTM9 273 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 UPB1Q9UBR1 384 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 LRP12Q9Y561 859 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 USP34Q70CQ2 3546 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 CD2P06729 351 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 DCAF7P61962 342 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 TMEM81Q6P7N7 255 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 TTLL10Q6ZVT0 673 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 ZNF627Q7L945 461 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 STK35Q8TDR2 534 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 CCDC107Q8WV48 283 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 SCPEP1Q9HB40 452 aa16.94■□□□□ 0.3
CBX1-202ENST00000393408 MRPS18BQ9Y676 258 aaKnown RBP16.94■□□□□ 0.3
CBX1-202ENST00000393408 TMED7-TICAM2A0A0A6YYA0 188 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 TMEM82A0PJX8 343 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 RFPL4AA6NLU0 287 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 RFPL4AL1F8VTS6 287 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 DOK2O60496 412 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 OR4E1P0C645 316 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 NR0B1P51843 470 aaKnown RBP16.93■□□□□ 0.3
CBX1-202ENST00000393408 EFNA3P52797 238 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 ZP2Q05996 745 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 ELAVL1Q15717 326 aaKnown RBP16.93■□□□□ 0.3
CBX1-202ENST00000393408 LY6G6FQ5SQ64 297 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 CDH26Q8IXH8 852 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 GALNT16Q8N428 558 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 OR6K3Q8NGY3 331 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 DPYSL5Q9BPU6 564 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 TBL1XR1Q9BZK7 514 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 MFFQ9GZY8 342 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 SHARPINQ9H0F6 387 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 CGGBP1Q9UFW8 167 aaPredicted RBP16.93■□□□□ 0.3
CBX1-202ENST00000393408 TMED7Q9Y3B3 224 aa16.93■□□□□ 0.3
CBX1-202ENST00000393408 KRBOX1C9JBD0 128 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 SRSF10O75494 262 aaKnown RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 IGHMP01871 453 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 FGF2P09038 288 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 MPGP29372 298 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 POLR2HP52434 150 aaKnown RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 MELKQ14680 651 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 TMEM205Q6UW68 189 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 C12orf45Q8N5I9 185 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 OR5M9Q8NGP3 310 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 SLC25A44Q96H78 314 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 SLC25A21Q9BQT8 299 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 TINAGL1Q9GZM7 467 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 CHRNA10Q9GZZ6 450 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 TRAV14DV4A0A0A6YYC5 116 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 SHISA7A6NL88 538 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 M0QYG6 137 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 LDLRAD4O15165 306 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 TO15178 435 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 PTGS2P35354 604 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 PLCXD2Q0VAA5 305 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 ELOCQ15369 112 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 C1orf140Q5VVS0 124 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 OR51A2Q8NGJ7 313 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 OR52N5Q8NH56 324 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 OR1S1Q8NH92 325 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 MYOZ1Q9NP98 299 aaPredicted RBP16.92■□□□□ 0.3
CBX1-202ENST00000393408 KIF26BQ2KJY2 2108 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 FREM3P0C091 2139 aa16.92■□□□□ 0.3
CBX1-202ENST00000393408 A8MVM7 634 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 PLPP3O14495 311 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 CDK2AP1O14519 115 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 ZNF735P0CB33 412 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 HLA-DQA1Q5Y7H0 255 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 ADGRE4PQ86SQ3 457 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 ZNF454Q8N9F8 522 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 EDAQ92838 391 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 ZNF587Q96SQ5 575 aaPredicted RBP16.91■□□□□ 0.3
CBX1-202ENST00000393408 GAL3ST1Q99999 423 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 H3BMH7 237 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 AMY2AP04746 511 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 NR0B2Q15466 257 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 HYAL4Q2M3T9 481 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 HSD17B13Q7Z5P4 300 aaPredicted RBP16.91■□□□□ 0.3
CBX1-202ENST00000393408 PDZD9Q8IXQ8 264 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 BVESQ8NE79 360 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 LHFPL5Q8TAF8 219 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 WWTR1Q9GZV5 400 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 SLCO5A1Q9H2Y9 848 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 COA3Q9Y2R0 106 aaPredicted RBP16.91■□□□□ 0.3
CBX1-202ENST00000393408 R4GMQ9 66 aa16.91■□□□□ 0.3
CBX1-202ENST00000393408 TCRBV16S1A1N1A0A5B0 115 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 LGALS8O00214 317 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 ALOX12BO75342 701 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 MPZL1O95297 269 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 PMPCAQ10713 525 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 TMED4Q7Z7H5 227 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 LMX1AQ8TE12 382 aa16.9■□□□□ 0.3
CBX1-202ENST00000393408 HHLA2Q9UM44 414 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms