RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 CDC7O00311 574 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 NARSO43776 548 aaKnown RBP5.32□□□□□ -1.56
TRAV35-201ENST00000390462 UGT1A9O60656 530 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 EEDO75530 441 aaKnown RBP5.32□□□□□ -1.56
TRAV35-201ENST00000390462 HBE1P02100 147 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 TACSTD2P09758 323 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ACSM4P0C7M7 580 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 PET100P0DJ07 73 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 CALCRP30988 508 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 PTGDSP41222 190 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 GDI2P50395 445 aaKnown RBP5.32□□□□□ -1.56
TRAV35-201ENST00000390462 MAGOHP61326 146 aaKnown RBP5.32□□□□□ -1.56
TRAV35-201ENST00000390462 C5orf64Q2M2E5 130 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ANKRD26P1Q6NSI1 321 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 BHLHA9Q7RTU4 235 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 LACC1Q8IV20 430 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF738Q8NE65 137 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 TTLQ8NG68 377 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 OR2Y1Q8NGV0 311 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 OR6X1Q8NH79 312 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 RFESDQ8TAC1 157 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF502Q8TBZ5 544 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 MAPK15Q8TD08 544 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ESR2Q92731 530 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF486Q96H40 463 aaPredicted RBP5.32□□□□□ -1.56
TRAV35-201ENST00000390462 C20orf173Q96LM9 149 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 SORT1Q99523 831 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 SIX2Q9NPC8 291 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 IL1RAPQ9NPH3 570 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 USE1Q9NZ43 259 aa5.32□□□□□ -1.56
TRAV35-201ENST00000390462 MAP3K15Q6ZN16 1313 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 DUOX1Q9NRD9 1551 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 IGLON5A6NGN9 336 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 USP27XA6NNY8 438 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 H0YHG0 523 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 hCG_2039718K7EN88 272 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF189O75820 626 aaPredicted RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 CEACAM4O75871 244 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 LSM8O95777 96 aaKnown RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 IGHV2-5P01817 119 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 HLA-GP17693 338 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 HLA-DMAP28067 261 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 RANBP1P43487 201 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 GSSP48637 474 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 FOXG1P55316 489 aaPredicted RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 SLC35B1P78383 322 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 DHODHQ02127 395 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 IL18R1Q13478 541 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 MED21Q13503 144 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 TPBGQ13641 420 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 NECTIN1Q15223 517 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 FAM189A2Q15884 450 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 SNCBQ16143 134 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 CLVS2Q5SYC1 327 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF57Q68EA5 555 aaPredicted RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 DUPD1Q68J44 220 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 REP15Q6BDI9 236 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF677Q86XU0 584 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 TMEM25Q86YD3 366 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 PDIK1LQ8N165 341 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ABHD12Q8N2K0 398 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 SVOPLQ8N434 492 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 MREGQ8N565 214 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 OR5AP2Q8NGF4 316 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 OR6K6Q8NGW6 343 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 PHF10Q8WUB8 498 aaKnown RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 CPNE4Q96A23 557 aaPredicted RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 TMEM80Q96HE8 168 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 MS4A14Q96JA4 679 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 CIB1Q99828 191 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 APOL2Q9BQE5 337 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 RSG1Q9BU20 258 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF426Q9BUY5 554 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 WDR13Q9H1Z4 485 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 MMP28Q9H239 520 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 PLEKHA1Q9HB21 404 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 CLN6Q9NWW5 311 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 C1orf109Q9NX04 203 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 B3GNT2Q9NY97 397 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 RSPH14Q9UHP6 348 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF646O15015 1829 aaPredicted RBP5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ANKRD36CQ5JPF3 1778 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 LRRC37AA6NMS7 1700 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 ZNF609O15014 1411 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 RIC1Q4ADV7 1423 aa5.31□□□□□ -1.56
TRAV35-201ENST00000390462 A0A1B0GW55 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 PSMB11A5LHX3 300 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 TVP23AA6NH52 213 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 SMIM23A6NLE4 172 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 MRPS12O15235 138 aaKnown RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 BUB3O43684 328 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 FRAT2O75474 233 aaPredicted RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 GJB5O95377 273 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DEXIO95424 95 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 TDP2O95551 362 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 RPSAP08865 295 aaKnown RBP5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L2P0CJ85 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L3P0CJ86 424 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L4P0CJ87 422 aa5.3□□□□□ -1.56
TRAV35-201ENST00000390462 DUX4L5P0CJ88 424 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms