RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 UBXN8O00124 270 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PGRMC2O15173 223 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 UBDO15205 165 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CXCL13O43927 109 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 NOS1APO75052 506 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 POP7O75817 140 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 FGF19O95750 216 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV3-48P01763 117 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 APRTP07741 180 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SRPRAP08240 638 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CNPP09543 421 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF705DP0CH99 300 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF705BP0CI00 300 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV1-8P0DP01 117 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CYP2B6P20813 491 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 FGF7P21781 194 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRTN3P24158 256 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 HTR2BP41595 481 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 GPR4P46093 362 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 KCNJ1P48048 391 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 UBE2E1P51965 193 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ROMO1P60602 79 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 KCNJ2P63252 427 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 HMGCS1Q01581 520 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 GALNT1Q10472 559 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM115Q12893 351 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 DHRS2Q13268 280 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 AQP6Q13520 282 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ENDOGQ14249 297 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PDGFRLQ15198 375 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 HAGHQ16775 308 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 TTMPQ5BVD1 217 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 DEFB121Q5J5C9 76 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 HECTD3Q5T447 861 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 C1orf134Q5TEV5 83 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRAMEF8Q5VWM4 474 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRAMEF7Q5VXH5 474 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 LRRC66Q68CR7 880 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPECC1LQ69YQ0 1117 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CAPN13Q6MZZ7 669 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 APOOLQ6UXV4 268 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 B3GLCTQ6Y288 498 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CLEC17AQ6ZS10 378 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 C1orf122Q6ZSJ8 110 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 GKN2Q86XP6 184 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SLC22A9Q8IVM8 553 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CDKL3Q8IVW4 592 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 PEX5LQ8IYB4 626 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 IQCKQ8N0W5 287 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZFP82Q8N141 532 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 MRPL43Q8N983 215 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 DEFB105AQ8NG35 78 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR1K1Q8NGR3 316 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPPL2BQ8TCT7 592 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 RAB2BQ8WUD1 216 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 UPRTQ96BW1 309 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ISOC1Q96CN7 298 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 LINC00526Q96FQ7 95 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM80Q96HE8 168 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 RNF170Q96K19 258 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZNF396Q96N95 335 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR4C12Q96R67 309 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 OR52B2Q96RD2 323 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 TXN2Q99757 166 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SDF4Q9BRK5 362 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 TMEM121Q9BTD3 319 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CNFNQ9BYD5 112 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ZSCAN16Q9H4T2 348 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 ALG9Q9H6U8 611 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 LRRC40Q9H9A6 602 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 VIPAS39Q9H9C1 493 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 LRTM1Q9HBL6 345 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 GPR84Q9NQS5 396 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SCML1Q9UN30 329 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 UBE2D4Q9Y2X8 147 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 CRYBG1Q9Y4K1 1723 aa-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 SPAG9O60271 1321 aaKnown RBP-1.66□□□□□ -2.68
RNU6-540P-201ENST00000384622 KDM5CP41229 1560 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 A0A1W2PP64 1363 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV7-81A0A0B4J1V7 117 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV1-69DA0A0B4J2H0 117 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 CLRN2A0PK11 232 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 GOLGA6L4A6NEF3 574 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 C17orf98A8MV24 154 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 VSTM5A8MXK1 200 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 HACD1B0YJ81 288 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 IBA57-AS1B1ANH7 110 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 H0YHG0 523 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 M0QZ58 72 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 M0R2N4 97 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PRRG1O14668 218 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 IFIT3O14879 490 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 UGT1A9O60656 530 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PAGE4O60829 102 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 UGT2B11O75310 529 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PSIP1O75475 530 aaKnown RBP-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 RAD51DO75771 328 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 PSMD10O75832 226 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 MOSP00540 346 aa-1.67□□□□□ -2.68
RNU6-540P-201ENST00000384622 IGHV1-69P01742 117 aa-1.67□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms