RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NSMAFQ92636 917 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 RAB1CQ92928 201 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 EGLN1Q9GZT9 426 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 OR51B6Q9H340 312 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 SAP30LQ9HAJ7 183 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 NDRG4Q9ULP0 352 aaKnown RBP11.08□□□□□ -0.64
RPAIN-202ENST00000381208 TMEM5Q9Y2B1 443 aa11.08□□□□□ -0.64
RPAIN-202ENST00000381208 ERICH4A6NGS2 130 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 EFCAB9A8MZ26 197 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 XKRYO14609 159 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 GSTA4O15217 222 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 ADH4P08319 380 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 COX5BP10606 129 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 MSR1P21757 451 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 CDAP32320 146 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 ERVS71-1P61550 626 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 LMO4P61968 165 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 PSG4Q00888 419 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 SF3A3Q12874 501 aaKnown RBP eCLIP11.07□□□□□ -0.64
RPAIN-202ENST00000381208 ALKBH6Q3KRA9 238 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 IFI44LQ53G44 452 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 ZNF730Q6ZMV8 503 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 RINLQ6ZS11 566 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 NRMQ8IXM6 262 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 BCAS4Q8TDM0 211 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 RCN3Q96D15 328 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 MARS2Q96GW9 593 aaKnown RBP11.07□□□□□ -0.64
RPAIN-202ENST00000381208 COG8Q96MW5 612 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 OR2H1Q9GZK4 316 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 EFCAB1Q9HAE3 211 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 TREM2Q9NZC2 230 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 ZDHHC8Q9ULC8 765 aa11.07□□□□□ -0.64
RPAIN-202ENST00000381208 CXCR6O00574 342 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 CDC14BO60729 498 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 PNPP00491 289 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 GATA3P23771 443 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 LAP3P28838 519 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 ERVK-25P63136 954 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 LIPEQ05469 1076 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 FMODQ06828 376 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 SCRN3Q0VDG4 424 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 CGB2Q6NT52 195 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 HACD2Q6Y1H2 254 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 TMPRSS11FQ6ZWK6 438 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 MBOAT2Q6ZWT7 520 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 USP51Q70EK9 711 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 FKBP9P1Q75LS8 142 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 CBLL1Q75N03 491 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 PEG10Q86TG7 708 aaKnown RBP11.06□□□□□ -0.64
RPAIN-202ENST00000381208 SLC15A3Q8IY34 581 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 LRRC75AQ8NAA5 344 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 OR51A7Q8NH64 312 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 KLF14Q8TD94 323 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-202ENST00000381208 LRRC37BQ96QE4 947 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 TSPAN32Q96QS1 320 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 NARFLQ9H6Q4 476 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 ZNF665Q9H7R5 613 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 KRCC1Q9NPI7 259 aaPredicted RBP11.06□□□□□ -0.64
RPAIN-202ENST00000381208 CMTM6Q9NX76 183 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 GRHPRQ9UBQ7 328 aa11.06□□□□□ -0.64
RPAIN-202ENST00000381208 LOC100509620A0A075B734 347 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 IGKV1D-43A0A0B4J1Z2 117 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 A0A0G2JMP0 313 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 A0A0X1KG70 313 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 FAM157AC9JC47 383 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 J3QLI3 93 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 PIP5K1CO60331 668 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 ZNF682O95780 498 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 FAM107AO95990 144 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 CD14P08571 375 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 COX4I1P13073 169 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 MAKP20794 623 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 GSTM3P21266 225 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 RPL4P36578 427 aaKnown RBP11.05□□□□□ -0.64
RPAIN-202ENST00000381208 WNT5AP41221 380 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 MMP16P51512 607 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 PPP1CBP62140 327 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 GPR139Q6DWJ6 353 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 VTCN1Q7Z7D3 282 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 TREML1Q86YW5 311 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 ZNF101Q8IZC7 436 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 NPEPL1Q8NDH3 523 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 OR4M2Q8NGB6 313 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 AKR7LQ8NHP1 331 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 ABHD4Q8TB40 342 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 SLC25A40Q8TBP6 338 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-202ENST00000381208 C4orf45Q96LM5 186 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 FAM107BQ9H098 131 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 WNT5BQ9H1J7 359 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 METTL17Q9H7H0 456 aaPredicted RBP11.05□□□□□ -0.64
RPAIN-202ENST00000381208 MAN2C1Q9NTJ4 1040 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 TBCCD1Q9NVR7 557 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 ARMCX1Q9P291 453 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 RPS6KA6Q9UK32 745 aa11.05□□□□□ -0.64
RPAIN-202ENST00000381208 FAM32AQ9Y421 112 aaKnown RBP11.05□□□□□ -0.64
RPAIN-202ENST00000381208 TRAV27A0A087WT01 109 aa11.04□□□□□ -0.64
RPAIN-202ENST00000381208 A0A087WUU8 490 aa11.04□□□□□ -0.64
RPAIN-202ENST00000381208 A0A1W2PPL8 197 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms