RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 PPP1CBP62140 327 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 TNFAIP6P98066 277 aaPredicted RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 CD47Q08722 323 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF154Q13106 437 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 TAF11Q15544 211 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 RUNDC3AQ59EK9 446 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 PTOV1Q86YD1 416 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 RBM45Q8IUH3 476 aaKnown RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 GPR32P1Q8NGA4 272 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 AKR7LQ8NHP1 331 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 GEMIN6Q8WXD5 167 aaKnown RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
VCX3A-201ENST00000381089 DCLRE1CQ96SD1 692 aaKnown RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 MS4A7Q9GZW8 240 aaPredicted RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
VCX3A-201ENST00000381089 TRRAPQ9Y4A5 3859 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 TANC2Q9HCD6 1990 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 ANGPT2O15123 496 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 OR7A10O76100 309 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 SLC2A10O95528 541 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 IGHV2-70P01814 119 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 RNASE1P07998 156 aaKnown RBP13.51□□□□□ -0.25
VCX3A-201ENST00000381089 FUT1P19526 365 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 GSTM3P21266 225 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
VCX3A-201ENST00000381089 CDAP32320 146 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 RBM34P42696 430 aaKnown RBP13.51□□□□□ -0.25
VCX3A-201ENST00000381089 MTNR1AP48039 350 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 ERVK-25P63136 954 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 CBX1P83916 185 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 PSG4Q00888 419 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 DEFA6Q01524 100 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 TMEM155Q4W5P6 130 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 DHDDSQ86SQ9 333 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 POU5F2Q8N7G0 328 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 FNDC8Q8TC99 324 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 NSMAFQ92636 917 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 SGTBQ96EQ0 304 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 MYLK2Q9H1R3 596 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 PATZ1Q9HBE1 687 aaKnown RBP13.51□□□□□ -0.25
VCX3A-201ENST00000381089 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF69Q9UC07 566 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 OR5V1Q9UGF6 321 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
VCX3A-201ENST00000381089 LOC100509620A0A075B734 347 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 LOC100653049A0A140TA62 436 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NPIPB13A6NJU9 1138 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NPIPB4C9JG80 1138 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 CLDN34H7C241 214 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 SURF4O15260 269 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 DCTN3O75935 186 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 KRT34O76011 436 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 IGF2P01344 180 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 ZNF12P17014 697 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 AQP2P41181 271 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 TAS2R41P59536 307 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 ESCO2Q56NI9 601 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 FAM27BQ5VT28 67 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 RFPL4BQ6ZWI9 263 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 OR4D11Q8NGI4 311 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NABP1Q96AH0 204 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 RBP7Q96R05 134 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 ALG12Q9BV10 488 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 OR2H1Q9GZK4 316 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 POLR2J2Q9GZM3 115 aaKnown RBP13.5□□□□□ -0.25
VCX3A-201ENST00000381089 POLR2J3Q9H1A7 115 aaKnown RBP13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NANOGQ9H9S0 305 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 MSL2Q9HCI7 577 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 MEPEQ9NQ76 525 aaPredicted RBP13.5□□□□□ -0.25
VCX3A-201ENST00000381089 MMP26Q9NRE1 261 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 MRGBPQ9NV56 204 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NDRG4Q9ULP0 352 aaKnown RBP13.5□□□□□ -0.25
VCX3A-201ENST00000381089 NDUFAF1Q9Y375 327 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 UGT2A1Q9Y4X1 527 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 TIMM10BQ9Y5J6 103 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 INSIG2Q9Y5U4 225 aa13.5□□□□□ -0.25
VCX3A-201ENST00000381089 ICMTO60725 284 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 CST2P09228 141 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 TUBG1P23258 451 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 PCGF2P35227 344 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 SLC6A9P48067 706 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 MTPNP58546 118 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 BTG1P62324 171 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 MAPRE2Q15555 327 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 TUSC1Q2TAM9 212 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 MUC20Q8N307 709 aaPredicted RBP13.49□□□□□ -0.25
VCX3A-201ENST00000381089 NPEPL1Q8NDH3 523 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 SAMD8Q96LT4 415 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 CGREF1Q99674 301 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 PRSS27Q9BQR3 290 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 C1QTNF5Q9BXJ0 243 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 SLITRK2Q9H156 845 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 TXNIPQ9H3M7 391 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 TUBG2Q9NRH3 451 aa13.49□□□□□ -0.25
VCX3A-201ENST00000381089 MAN2C1Q9NTJ4 1040 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms