RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ZNF587Q96SQ5 575 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 BEX2Q9BXY8 128 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 B3GAT2Q9NPZ5 323 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 PLEKHB1Q9UF11 243 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 GPN3Q9UHW5 284 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-201ENST00000379433 SRPK3Q9UPE1 567 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 TMED7Q9Y3B3 224 aa9.75□□□□□ -0.85
NEDD9-201ENST00000379433 A0A1W2PQ09 198 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SLC16A7O60669 478 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 UBE2G2P60604 165 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 KRR1Q13601 381 aaKnown RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SLC25A35Q3KQZ1 300 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 CNIH2Q6PI25 160 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SERPINA12Q8IW75 414 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 ST7LQ8TDW4 575 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 RXFP3Q9NSD7 469 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MED17Q9NVC6 651 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 FOXD3Q9UJU5 478 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SEC14L5O43304 696 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SPARCP09486 303 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 PGCP20142 388 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 ID4P47928 161 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 FMODQ06828 376 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 TPBGQ13641 420 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF57Q68EA5 555 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 VASNQ6EMK4 673 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 RPL13AP3Q6NVV1 102 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MDGA2Q7Z553 956 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MRGPREQ86SM8 312 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 NR2C2APQ86WQ0 139 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MAML2Q8IZL2 1156 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 OR6V1Q8N148 313 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MAFIPQ8WZ33 124 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 GCDHQ92947 438 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 FBXO17Q96EF6 278 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 HDHD2Q9H0R4 259 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 C19orf12Q9NSK7 152 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 RASD1Q9Y272 281 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 SF3B6Q9Y3B4 125 aaKnown RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 TEX46H3BTG2 121 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 PPM1BO75688 479 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 VAMP5O95183 116 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 RAB13P51153 203 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 LRRN1Q6UXK5 716 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 THAP4Q8WY91 577 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 PELI1Q96FA3 418 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 NEU1Q99519 415 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 TIMP4Q99727 224 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF649Q9BS31 505 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 RAB33BQ9H082 229 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 PPA2Q9H2U2 334 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 CCDC59Q9P031 241 aaKnown RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 MYEF2Q9P2K5 600 aaKnown RBP9.74□□□□□ -0.85
NEDD9-201ENST00000379433 PISDQ9UG56 409 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 KLHDC2Q9Y2U9 406 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 B3GALT1Q9Y5Z6 326 aa9.74□□□□□ -0.85
NEDD9-201ENST00000379433 OR2AT4A6NND4 320 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PRR32B1ATL7 298 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 CD14P08571 375 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 RD3LP0DJH9 198 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PNMTP11086 282 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 S100A7P31151 101 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 VAMP2P63027 116 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PMP22Q01453 160 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 OXA1LQ15070 435 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ADIPOQQ15848 244 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 SLC25A30Q5SVS4 291 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 LINC00346Q8IVM7 164 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 DNAAF1Q8NEP3 725 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ABHD4Q8TB40 342 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 UBASH3BQ8TF42 649 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 TMCO6Q96DC7 493 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 TSPAN32Q96QS1 320 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF251Q9BRH9 671 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 TTYH2Q9BSA4 534 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF426Q9BUY5 554 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 POTEKPQ9BYX7 375 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 NRIP3Q9NQ35 241 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 COA4Q9NYJ1 87 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ZNF224Q9NZL3 707 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PPP4R1LQ9P1A2 415 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 MIOXQ9UGB7 285 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PIEZO2Q9H5I5 2752 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 GSTP1P09211 210 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 SNRPBP14678 240 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 RBM34P42696 430 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 POU3F1Q03052 451 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 HSF2Q03933 536 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 CBFBQ13951 182 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 SF3A2Q15428 464 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 ACKR1Q16570 336 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 MESTQ5EB52 335 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 C9orf152Q5JTZ5 239 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 METAP1DQ6UB28 335 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 DPY19L2P2Q6ZN68 376 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 PRSS42Q7Z5A4 293 aa9.73□□□□□ -0.85
NEDD9-201ENST00000379433 CPEB2Q7Z5Q1 589 aaKnown RBP9.73□□□□□ -0.85
NEDD9-201ENST00000379433 OR4D9Q8NGE8 314 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms